Gene RoseRS_0029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0029 
Symbol 
ID5206962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp31039 
End bp31383 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content55% 
IMG OID640593663 
Productanti-sigma-factor antagonist 
Protein accessionYP_001274422 
Protein GI148654217 
COG category 
COG ID 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.767198 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAATG AAACGAACGA AGTGATCCGC CGTGAGGAGT TTGGCGATGT CGCGGTGCTC 
CACATAATGA CCAATAGCGT CGATGCCGTG TCGGCCAGCG CAATTGAGGC AGTCGCAACA
GCAACTGCCA TGCGCCCGAT CACGGTGCTC GATTTTGCAA ATGTGGCATT TATCAACTCA
GCAGGCATCT CGGCGCTGCT CAAGTTTGTC GTGTCGGCAA AGAAATCGGG CTATACCCTG
TACGCCATGA ATGTGACCCC GCACCATCAG AAGGTCTTCA AGATGGTCGA GATGTCGCGC
TATATGCCCC CCATCGAGGA GCGTGATCTC GCTGCGTATC GGTAG
 
Protein sequence
MTNETNEVIR REEFGDVAVL HIMTNSVDAV SASAIEAVAT ATAMRPITVL DFANVAFINS 
AGISALLKFV VSAKKSGYTL YAMNVTPHHQ KVFKMVEMSR YMPPIEERDL AAYR