| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0026 |
|---|
| Symbol | |
|---|
| ID | 5206959 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 26915 |
|---|
| End bp | 28282 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 455 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640593660 |
|---|
| Product | isochorismate synthase |
|---|
| Protein accession | YP_001274419 |
|---|
| Protein GI | 148654214 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1169] Isochorismate synthase |
|---|
| TIGRFAM ID | [TIGR00543] isochorismate synthases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.828763 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCATCGTA ACTCATACCA GCAACACTAC GGTCGCCTGA TCAGCATGAG CATGCCATGC
CCTGGGGTGT CTCCCGCCGA TCTCCTGCAT GTTGCACGCG GACAACCGCG GTCGTACTGG
GAGAGTGCGC GCGATGGGAT TGCATTCGCT GGCATGGGGA TCGCGGTTGA ATTGATGGCG
TGGGGGGGCA ACCGTTTTGC CGGGATTGAA CAGCAGGCGC GGGCGTTGTT CGAACATGCA
ATCATGATCG ATGAACATGA GCCGCTCGCC GCGCCGCGTC TCTTCGGTGG CTTTTCGTTC
CGCGACGATT TTGTGCCTGA TCTGGCATGG GCTGATTTTC CGCCAGCGCA CTTTGTGTTG
CCGCATTATC AACTGGTGCG TGTCCGCAAT TCCTTCTGGT TGACGTTGAA TGTCCATGCA
CCGCTCAGCG AAGATCCGCG CACGCTGGCG CCCGATCTGC GCGAGGCGTT GCTGGCGCAG
ATCGATCGGT TGCAGCGTGT ATCTTCTTCT CCTGCTGCTC GTCATTCATC AGGGCGTATT
GTCTATCCCA TGCCGTTCGA TCAGTGGTCG CGCAGCGTGG AACGGATTGT GCAGCAGATC
CGCGCTGGCG TTTTGAAGAA AGTTGTGCTG GCGCGTATCG CTGAGGCATC GTTCGACGAA
CCGGCGGATG TTGATGGTGC ACTGGCGCAT CTGGAACGAC GCTATCCCGA TACCTATCGC
TTTCTGTTCG AGCCGCGTCC AGGTCGTGCG TTCTTCGGGG CAACACCCGA ATTGCTGGTG
CAGGTGAAGG GTGATCGGGT GATGACCATG GCGCTGGCTG GCAGCATCCG ACGTGGTGCG
ACGCCCGACG AAGATGAGCG TCTTGCCGCA GTGCTGCTCG ATAGCGCTAA GGATCGCCAT
GAACATCAGA TTGTGGTGGA CGAGGTGCGT GCTCGCCTGA CTCCACTGAC CCGTCATCTG
GAAGTCGGTG CGACAGGTGT GATGACGCTG AGCAATATTC AGCACCTGCA TACGCCGATT
GATGGGATAC TGCGCGAACC GCGCGGTGTT CTGCCGCTCG TCGCAACCCT GCACCCAACG
CCGGCGCTCG GCGGTGAGCC ACGTGAGGCG GCGATGCGCC TGATCGGTGA ACTGGAACCG
GCGCCGCGCG GATGGTACGC AGCGCCGGTC GGCTGGATCG ACCGACGGCT CGATGGACAG
TTTGGGGTCG CCATTCGTTC GGCAGTCGTA CAAACGACAC GCGCCTGGCT GTATGCCGGG
GCGGGTATCG TCGCGGCAAG TGATCCGCAG CGCGAGTGGG ACGAAACGAA CCTCAAGTTT
CGTCCGATGC TGGAGGCGCT CGGTTTGCCC GCCGATGGGT ATCGGTAG
|
|---|
| Protein sequence | MHRNSYQQHY GRLISMSMPC PGVSPADLLH VARGQPRSYW ESARDGIAFA GMGIAVELMA
WGGNRFAGIE QQARALFEHA IMIDEHEPLA APRLFGGFSF RDDFVPDLAW ADFPPAHFVL
PHYQLVRVRN SFWLTLNVHA PLSEDPRTLA PDLREALLAQ IDRLQRVSSS PAARHSSGRI
VYPMPFDQWS RSVERIVQQI RAGVLKKVVL ARIAEASFDE PADVDGALAH LERRYPDTYR
FLFEPRPGRA FFGATPELLV QVKGDRVMTM ALAGSIRRGA TPDEDERLAA VLLDSAKDRH
EHQIVVDEVR ARLTPLTRHL EVGATGVMTL SNIQHLHTPI DGILREPRGV LPLVATLHPT
PALGGEPREA AMRLIGELEP APRGWYAAPV GWIDRRLDGQ FGVAIRSAVV QTTRAWLYAG
AGIVAASDPQ REWDETNLKF RPMLEALGLP ADGYR
|
|---|
| |