| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0025 |
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| Symbol | |
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| ID | 5206958 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 25063 |
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| End bp | 26814 |
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| Gene Length | 1752 bp |
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| Protein Length | 583 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640593659 |
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| Product | 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase |
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| Protein accession | YP_001274418 |
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| Protein GI | 148654213 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1165] 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase |
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| TIGRFAM ID | [TIGR00173] 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.816015 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAATC GCAACATTTT TTACGCAACG ACACTGGTGG ATGAACTTGC CCGCGCCGGG
TTACGCTTTG TGTGCCTGGC GCCCGGTTCG CGCAATACGC CGCTGGTGCT GGCATGCGCG
CGCCATCCCG CAATCAAAGT CTTTTCGCAC CTGGACGAGC GCAGCGCGGC GTTTTTTGCG
CTCGGTCTGG CGCTGGCGAC CGATACGCCG GCTGCGGTTG TTTGCACGTC TGGTTCGGCG
GCGGCGAATT TCTTTCCGGC GATTGTGGAG GCGCACCAGG CGGGTGTGCC GCTGCTGGCG
CTGACAGCGG ATCGCCCCCA CGAACTGCGC GACAGCGGCG CAAACCAGAC CATCGATCAG
GTGAAAATGT TTGGCGGCTT TGTGCGCTGG AGTGTCGATC TGGCGCTGCC GGAAGCGACC
CCGCCGCCGG TTGTGGTGCG CTCCCTGCGG ACGCTGGCGG CGCGAGCGAT GGCGATCGCT
GGCGGTGAGC CGCCAGGAGT GGTGCATCTG AACCTTCCCT TCCGTCCACC GCTCGAACCG
ACGCCGGTCG CCGGAGACAT CACCGCTCCC CCGGACGCGG CACAACCACG CCAGGCGGGT
GCGCCCTACA CGTATTGCCT GACCGCGACA CGCTCTGGAG TGCCAGAAGC AGTTATCGAA
CAGATTGCCT CCCTCCTTCA GCAGCACGAA CGCGGTCTGA TCGTCTGCGG TCCGCGCTGC
CCCAGCGGGG AGTTTGGCGC ACTGGTGAGC GAACTGGCGG ATCGCACCGG CTACCCGGCG
CTGGTTGATG GTGTATCGGG GATCCGTTTT GGCTATCCGG GCGTGATTGG CGGGTACGAG
ACATTCCTCT TCGGCGAACA CTCGTTTCCG CCCCCCGATG TGGTGGTGCG GTTCGGCGCG
GTTCCCACCT CGAAGTGGCT CAACCAGTAT CTCGACACGG CTGCGCCGTC GGCGGTCATC
CATGTGCGCG CTGGCGGCGT ATGGGCGGAT GACAGTCATC GGGTGAGCCA TTTCATCGCA
GCGGATGAGT CTGCGTTCAT TCGGGCGCTG TTGCCGCACC TGAAGGAGCG CCGGGGCGCA
TGGATACAAA TGTTCGAGGA AGCGGAAGCG CAGGTCTGGT CGGCAGTTGA AGCCGCTCTT
AACGACGAAC CGTATTTCGA CGGCGCTGCT GTCTACGACG CTGTGAGTCT GCTGCCGGAA
GGTGCGGCGC TCTTCGTCGG CAACAGCCTG CCGGTACGTC ATCTCGACCA GTTCGGGAAA
CCGGGCGCCC GGCGTATCCA TGCCTTTGCG AACCGGGGCG CATCAGGCAT CGATGGGAAT
ATCTCGACGG CGCTTGGCGT CGGCGCGGGA CGACCCGATA CGCCGATGGC AGCCATTGTT
GGCGATATTA CGTTCTACCA CGATATGAAT GGCTTGCTGG CAGTGCGACG TTGCGGCGTT
CCAATAACGA TCGTGCTGCT CAACAACGAT GGCGGCGGCA TCTTTCATCG TCTGCCGATC
AACCGCTTCG AGCCGGAGTT TACCGATTAT TTCGTGACGC CGCATGGGTT GCATTTTGCT
CACGCGGCGA AGATGTATGG TCTGGACTAC GTACAGGTGC GGGATCGCGA GGCATTCCGG
CGCGCCTTCC GCGAGAGCAT CGAGGCGCGC GCTGCAACGA TCATCGAACT CCGCACCGAT
GCGCGCGCCG ATCTCGCCCG TCGTCCGGCT CTGATGCGGT CTGCAAAAGC ATCCGATGTT
CGTGGGTTGT AG
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| Protein sequence | MTNRNIFYAT TLVDELARAG LRFVCLAPGS RNTPLVLACA RHPAIKVFSH LDERSAAFFA
LGLALATDTP AAVVCTSGSA AANFFPAIVE AHQAGVPLLA LTADRPHELR DSGANQTIDQ
VKMFGGFVRW SVDLALPEAT PPPVVVRSLR TLAARAMAIA GGEPPGVVHL NLPFRPPLEP
TPVAGDITAP PDAAQPRQAG APYTYCLTAT RSGVPEAVIE QIASLLQQHE RGLIVCGPRC
PSGEFGALVS ELADRTGYPA LVDGVSGIRF GYPGVIGGYE TFLFGEHSFP PPDVVVRFGA
VPTSKWLNQY LDTAAPSAVI HVRAGGVWAD DSHRVSHFIA ADESAFIRAL LPHLKERRGA
WIQMFEEAEA QVWSAVEAAL NDEPYFDGAA VYDAVSLLPE GAALFVGNSL PVRHLDQFGK
PGARRIHAFA NRGASGIDGN ISTALGVGAG RPDTPMAAIV GDITFYHDMN GLLAVRRCGV
PITIVLLNND GGGIFHRLPI NRFEPEFTDY FVTPHGLHFA HAAKMYGLDY VQVRDREAFR
RAFRESIEAR AATIIELRTD ARADLARRPA LMRSAKASDV RGL
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