| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0010 |
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| Symbol | |
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| ID | 5206943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 11402 |
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| End bp | 13084 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640593644 |
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| Product | WD40 domain-containing protein |
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| Protein accession | YP_001274403 |
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| Protein GI | 148654198 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.348529 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0411544 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTTTCTC TCAAAACCAT TGCCCACTTT TGTTCAATGC TTTTGCTGCT GGCGTTGATA
CTGACACCGG CGGGGTCTGT TCGCGCTGCG CCGGGGAATA CCATTCGTGT CTCAGTTGCT
TCGGATGGAA CGCAAGCAAA TGGCGGGTCT TTCACTCCTT CCATCTCTGC CGACGGGCGC
TATGTGGCAT TTGCATCAAT TGCTGTAAAT CTGGTGAGTG GGGATACAAA TGGCGTCCAA
GACATCTTCG TTCACGACCG GCAGACGGGC CAGACGACTC GCGTTTCAGT CGCTTCAGGC
GGAGCGCAAG CGAATGGCCC TTCATTTGAT CCCTCCATCT CCGCCGACGG GCGCTATGTG
GCGTTTGCAT CGCTTGCCAC CAACCTGGTG AGCGGGGATA CGAATAACGA ACAAGACATC
TTCGTCCACG ACCGGCAGAC TGGTCAGACC ACCCGCGTCT CGGTGGCTAC AGGCGGAGGA
CAAGCCAACC TCGCTTCGTC TGATCCTTCC ATCTCTGCTG ATGGGCGCTA CGTGGCATTT
GAGTCGATTG CCAGCAACCT GGTGAGTGGG GATACGAACA ATACTGGAGA CATCTTCGTC
CACGACCGGC AGACAGGCGC CACCACCCGT GTCTCTATCG GTCCGGGAGG CACGCAAGCG
AATCGCGGGT CACTCGCTCC CTCTATCTCC GCTGACGGGC GCTATGTGGC ATTTCATTCA
TCTGCCACAA ACCTGGTGAG CGGGGTTACG AATGGCACCA CACACATCTT CGTCCACGAC
CGGCAGACAG GTGCTACCAC TCGCGTCTCT GTCGCTTCTG ATGGAACGGA AGGGAACAGT
GTATCAATTA AACCCTCCAT CTCCGCCGAC GGGCGCTACG TGGCGTTTCA GTCGATAGCC
ACAAACCTGG TGAGTGGGGA TACGAATGGT ACCCAAGACA TCTTCGTTCA CGACCGGCAG
ACCGGCCAGA CCACCCGCGT CTCTGTCGCT TCTGATGGAA CGGAAGGAAA CAGTGGGTCA
AATGATCCCT CCATCTCCGC CAACGGGCGC TATGTGGCAT TTCAGTCGCA GGCTAACAAC
CTGGTGAGCG GGGATACTGG TTTCATCACA GACATCTTCA TTCATGACCG GCAGACTGGG
GTCACCACCC GTGTCTCTAT TGCTTTCGAC GGGACGGAAG CGAACAACGT GTCATCTGCT
CCTTCCATCT CTGCCGATGG GCGCTATATA GCATTTGAGT CGAATGCCAG CAACCTGGTA
GACGGGGATA CGAATGGTAC CCAAGACATC TTCGTTCATG ATAGAGAAGA CAACACTGCC
CCCACTGTTG TCTCTATCAC TCGCGCCGAC CCGAACCCGA CCAGTGCCGC CAGCGTGCGC
TTCACGGTCA CATTCTCTGA ACCTGTGACT GGCGTGGACG CAAGCGACTT CGCCCTTACT
ACCACCGGCA GTCTAAGCGG CATGAGCGTC ACGAGCGTCA GCGGTTCGGG CAACACTTAC
TCCGTCACGG TAAGCACCGG TACAGGCACA GGCACGCTGC GGCTGGACGT GATCGATAAC
GATACTATTA TCGATGCAGC TGGCAATCCC CTCGGCGGTT CGGGTTTCGG CAATGGGAAC
TTCACCGATG GGGAGATCTA CACCATCCAG AAGGCCATCT TTTTGCCTTT GATCGTTCGT
TAG
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| Protein sequence | MVSLKTIAHF CSMLLLLALI LTPAGSVRAA PGNTIRVSVA SDGTQANGGS FTPSISADGR
YVAFASIAVN LVSGDTNGVQ DIFVHDRQTG QTTRVSVASG GAQANGPSFD PSISADGRYV
AFASLATNLV SGDTNNEQDI FVHDRQTGQT TRVSVATGGG QANLASSDPS ISADGRYVAF
ESIASNLVSG DTNNTGDIFV HDRQTGATTR VSIGPGGTQA NRGSLAPSIS ADGRYVAFHS
SATNLVSGVT NGTTHIFVHD RQTGATTRVS VASDGTEGNS VSIKPSISAD GRYVAFQSIA
TNLVSGDTNG TQDIFVHDRQ TGQTTRVSVA SDGTEGNSGS NDPSISANGR YVAFQSQANN
LVSGDTGFIT DIFIHDRQTG VTTRVSIAFD GTEANNVSSA PSISADGRYI AFESNASNLV
DGDTNGTQDI FVHDREDNTA PTVVSITRAD PNPTSAASVR FTVTFSEPVT GVDASDFALT
TTGSLSGMSV TSVSGSGNTY SVTVSTGTGT GTLRLDVIDN DTIIDAAGNP LGGSGFGNGN
FTDGEIYTIQ KAIFLPLIVR
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