Gene RoseRS_0006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0006 
Symbol 
ID5206939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp7035 
End bp7766 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content62% 
IMG OID640593640 
Producthypothetical protein 
Protein accessionYP_001274399 
Protein GI148654194 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0363039 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACAG AGTTGAGTGT CGGCGACGTG CTGGCGCTGC TGGCGAAAGG CGAAATGGAA 
GTCCAGGGCA TGATGCCCTG GAGCAGTAAC TATACGCTGC TCGTCACTGT GCGCGACGGC
GATCTGCAGG GGCTTGCCGT GTACAAGCCA CGCCGCGGCG AACGCCCGCT ATGGGATTTT
CCGCGCGGTA CGTTGTGTCA ACGGGAGTTC GCCGCCTTCC TGCTCAGCGA AGCCCTCGGC
TGGTCGCTTG TGCCGCCGAC CGTTCTGCGG GATGGTCCGT ATGGCTATGG CTCGGTGCAG
TTGTATATCG ACTGCGACCA GGATGCGCAT CTGTTCACCA TGCAGAAGGA GGGCGGCTAC
GAGGATCAAC TCGCGCGCCT GGCCGCCTTC GACATCCTCT CGAACAATGC CGATCGCAAG
AGCGGCCATT GTTTGAAGGG AACGGATGGA CGCCTCTGGG CGATTGACCA CGGTATCTGC
TTTCACGCCG AACCGAAGTT GCGAACCGTG CTCTGGGACT ACGCTGGCGA ACCGATCTGT
GAAGAGATCA TGGCAGACCT GCGCGCATTG CGTGAAGATG TTCGCAACGG CAGGCGGTTC
ATCCGCGCAC TCGAAGGGTT GCTCGCTCCC GAAGAGGTGC GCGCCTTCCG CCGCCGCCTC
GACCGCCTGA TCGAAACCGG GTGCTACCCC GATCCCGGCG CTGCACGCCA TATTCCCTGG
CCTCCTGTCT AG
 
Protein sequence
MSTELSVGDV LALLAKGEME VQGMMPWSSN YTLLVTVRDG DLQGLAVYKP RRGERPLWDF 
PRGTLCQREF AAFLLSEALG WSLVPPTVLR DGPYGYGSVQ LYIDCDQDAH LFTMQKEGGY
EDQLARLAAF DILSNNADRK SGHCLKGTDG RLWAIDHGIC FHAEPKLRTV LWDYAGEPIC
EEIMADLRAL REDVRNGRRF IRALEGLLAP EEVRAFRRRL DRLIETGCYP DPGAARHIPW
PPV