Gene Lreu_1897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1897 
Symbol 
ID5189050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand+ 
Start bp1956093 
End bp1956671 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content32% 
IMG OID640591740 
ProductTetR family transcriptional regulator 
Protein accessionYP_001272471 
Protein GI148545101 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones72 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT CTAAAACTGA GAAAAAAATT CAAGATGCCT TACTATTACT TTTAAAAACG 
GAAAGTATTA ACCACATCAC CATGAGCCAG ATTGCTCAAA AAGCTAATCT TAATCGTGTC 
ACTCTCTATC GACACTACAA CGATAAATGG GATATTTTAG AGAATATAGA ACAAGAATTT 
CTTCATAAGT TAGACACTCC GCATGCAAAA ATGATCACTA ATCTTCAGCT AACTACTCAG 
TCTTTACATC CTCATCCTAA TTTAAGAGCA CTAACAAGCT TCTTTAAGGT CTTTCAAGAT 
AATTTTCCTC TTTTGCAAGT TCTTATGGGT CCAAATGCCA ACTTAGGCTT TACTAATAAA 
TTAATGACTT ATTTAATCAA CTTAGAAGAA AAATCACATC CTTACATCCC GGTTAGTATC 
CAGAAATTGA ATCCAGATAT GTTTTCTTAC TATAGTATTT CCTCTTTGAT CGGAATAATT 
CAGTTTTGGC GAAAAAATCA AAATTACTCA CCATCACAAA TGGCAGAATT TTTCTTTAAA 
ATTCGTATCG GTGCTATTAA AGAATTCCAA AACAAATGA
 
Protein sequence
MKKSKTEKKI QDALLLLLKT ESINHITMSQ IAQKANLNRV TLYRHYNDKW DILENIEQEF 
LHKLDTPHAK MITNLQLTTQ SLHPHPNLRA LTSFFKVFQD NFPLLQVLMG PNANLGFTNK 
LMTYLINLEE KSHPYIPVSI QKLNPDMFSY YSISSLIGII QFWRKNQNYS PSQMAEFFFK 
IRIGAIKEFQ NK