| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1865 |
|---|
| Symbol | |
|---|
| ID | 5190121 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | - |
|---|
| Start bp | 1925702 |
|---|
| End bp | 1926994 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640591708 |
|---|
| Product | type I phosphodiesterase/nucleotide pyrophosphatase |
|---|
| Protein accession | YP_001272439 |
|---|
| Protein GI | 148545069 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1524] Uncharacterized proteins of the AP superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAGC ATAAGCTAAT TGTCATTTCG CTAGATTCAC TAGGGTTTCG TGACCTAAAC
GAATTACGCC AAATAACACC AACATTAGCG AATTTAATAA AAAAAGGAAC CTGGGTAAAA
AAAGTTAAAG GAATCTTTCC AACGTTAACT TACCCATCCC ATACTTCGAT TATTACCGGT
CAGTATCCGG CTGTGCATGG AATTGTTAAC AATACTAAAT TGCAGCCACG CCGGCAATCG
CCTGACTGGT TCTGGTATCG AAAAGATATT CAATCGATGC CCCTCTATGA TATTGCAAAA
GAAAAGGACT TAACAACTGC TGCATTTTTG TGGCCTGTTA CTGCTGGCAG TAAGATTGAT
TATAACCTTG CGGAAATCTT TCCTAATCGA ATTTGGACAA ATCAAGTACT GGTTTCGTTA
AAGGCAAGTA GTCCGTTATT TTTATATGAA ATGAATAAGA AATACGGTAA ATTACGGCAC
GGAATTAAGC AACCGTGGCT TGACGATTTT GTAACAGCAT GTGCGGTTGA TACGATTAAA
AATAAAAAGC CAGACTTAAC CTTAATTCAC TTAGTTGATA TGGATAGTAT GCGTCACCGT
TATGGGGTTC GATCACCACA AGCAAAAGAA GCATTGCACC GTCTAGATAA ACGCGTAGCT
AAGATAATTC AAGCGACAAA AGATACCGGT ACTTACCCGC AAACAGACTT TGTAATTTTA
GGAGATCACT ATCAAATTAA TGTTGATAAG ATGATTCATT TGAATATGCT ATTTGCGCAA
CAAGGACTTC TTCACCCTCT TGGAAAGAAA AGTACTTATC GAAATAACTG GCAAGTCACT
GCTAAAACTT GCGATGGAGA AACTTATATT TACACTCGTG GTGCCGTGGA TCGAGGAAAA
CTTAAGCAAA TGATTGCTGG TGTCGAAGGC GTTGAGCGAA TCTATGATAA CGCAACGGCG
ATCAAACGGG GCGCAGATCC TAAGTGCACA TTCCTCGTCG AAGCCAAACC GGGATACTAT
TTCACTGATG AGGTAAACAG GCCAGCGATT GTCGAAAAAG TTGATTCGGA ATCAATTGGA
ACTCACGATC GCTATCGAGG GGTCCATGGC TACGGGCCAA CACAAGCAAA TTACTTCACT
ACTGCTATTT TTGCCGGTCC ACAAATCAAA GGTGGTGCGA CTGTTGAAAA TGCTCACCTG
GTTGATGAAG GACCGACATT TGCTAAATTA TTAGGATTAC ATTATCCGGC TCCAACTGCC
GGACAAGCAA TTGATGCGAT CTTTAAAGAC TGA
|
|---|
| Protein sequence | MKQHKLIVIS LDSLGFRDLN ELRQITPTLA NLIKKGTWVK KVKGIFPTLT YPSHTSIITG
QYPAVHGIVN NTKLQPRRQS PDWFWYRKDI QSMPLYDIAK EKDLTTAAFL WPVTAGSKID
YNLAEIFPNR IWTNQVLVSL KASSPLFLYE MNKKYGKLRH GIKQPWLDDF VTACAVDTIK
NKKPDLTLIH LVDMDSMRHR YGVRSPQAKE ALHRLDKRVA KIIQATKDTG TYPQTDFVIL
GDHYQINVDK MIHLNMLFAQ QGLLHPLGKK STYRNNWQVT AKTCDGETYI YTRGAVDRGK
LKQMIAGVEG VERIYDNATA IKRGADPKCT FLVEAKPGYY FTDEVNRPAI VEKVDSESIG
THDRYRGVHG YGPTQANYFT TAIFAGPQIK GGATVENAHL VDEGPTFAKL LGLHYPAPTA
GQAIDAIFKD
|
|---|
| |