| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1841 |
|---|
| Symbol | |
|---|
| ID | 5189471 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | - |
|---|
| Start bp | 1897863 |
|---|
| End bp | 1898717 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640591686 |
|---|
| Product | protein of unknown function DUF915, hydrolase family protein |
|---|
| Protein accession | YP_001272417 |
|---|
| Protein GI | 148545047 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4814] Uncharacterized protein with an alpha/beta hydrolase fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 81 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA GCCATATTGG GATTGGTATA GTGATAGTAA TTGTTATCCT GGCAATAATT
GGTGGGGCAG TTTGGCGTCA GCAAAAACAT AGTAAGTATG TGCAATCAAC AACGCCAACG
TTATTTTTCC ATGGTGGAGG CAGTAGTTAT CATGCAGAAG AACACATGGT AAATGCTGCT
AAAAAAGCTG GGGTAACGAG CACAGTCTTG CGAGCTGATG TTGCTAATAA CGGAAAAGTT
ACTCTTCATG GTTCAATGCA TAAAGGGGCC ATCAATCCAA TTGTTGAGGT GAATTATGAT
AACAATAGGC AGTTGGATTT TAATAAGCAT GGCGAATATG CGACAAATGT TGTAAAGGCA
TTACAGAAAC GCTATCGCAT AACTAAGATT AATATGGTTG GTCATTCCCT GGGAAATATT
TCGATTATTT ACTATATGTT GCAAAACGGT AAAAATCAGA ATATGCCTCA ATTACAAAAA
CAGGTTGATA TTGCAGGTCA TTTTGCGGGA TTGAATTTTA AACAGGTACC TGCTGCTATT
CAGCAACCAG TTGGAATGAA ATTAAATAAA GACGGAAAGC CAAATGAAAT GAACGCCACA
TATCGTCAAA TGACAGAGGT CCGGCAAACT TATCCCAAAG GTCAAGTAGC GGTTCTTAAT
ATTATTGGTG ATGTTGGTAA TCATTCAGAC GGTACTGTTG ATAATGCTTC ATCATTGTCA
CTTAAATATT TAGTAGCTGC TCGGGCAAAG TCATACCGTG TTCTAAAAAT AACAGGAAAA
GATGCTCAAC ATTCGAAACT TCATAATAAT GCTCAAGTTG ATAAGGCATT AATTAATTTC
TTATGGGGTA AATAA
|
|---|
| Protein sequence | MKKSHIGIGI VIVIVILAII GGAVWRQQKH SKYVQSTTPT LFFHGGGSSY HAEEHMVNAA
KKAGVTSTVL RADVANNGKV TLHGSMHKGA INPIVEVNYD NNRQLDFNKH GEYATNVVKA
LQKRYRITKI NMVGHSLGNI SIIYYMLQNG KNQNMPQLQK QVDIAGHFAG LNFKQVPAAI
QQPVGMKLNK DGKPNEMNAT YRQMTEVRQT YPKGQVAVLN IIGDVGNHSD GTVDNASSLS
LKYLVAARAK SYRVLKITGK DAQHSKLHNN AQVDKALINF LWGK
|
|---|
| |