| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1825 |
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| Symbol | |
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| ID | 5189638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | - |
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| Start bp | 1877134 |
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| End bp | 1878054 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640591670 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001272401 |
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| Protein GI | 148545031 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATATC GGTGGCAGAT TCATGAAAAG TTAGCTGATA ACCAGGTGCC GAAACCATTA
CGCAAGTTAC TTCATGATCA ATGGCTGCTT CCTAATCGGC TAATTCACTA TTTGCGGATT
AGGCGGACAG TGCTTGTTAA TGGCAACTAT CGATCCATGA ATGAGATTGT GGAGAAAAAT
GATAATATTC AATTATTATT TTGTGGTGAT GAAATTCGGA CCCCCACCGC AAATGATTAT
ATTCCGTCTT CGCAATCACA TTTAGAGGTC CTTTATGAGA ATCGCGATTT GTTAGTAGTA
AATAAACCGC GGGGACAAAA AACTCACCCT AATTACCATG GCGAAACAGG GACATTAATG
AATGATGTTG CAGGCTATTT AGCGCATAGT CAAAATAATG CTTATATGGT CCATCGGATA
GACTTACAAA CGAGTGGAGC AGTAATTGTT GCTAAGAATC CAATTGTTGT TCCAATCCTT
AACCGATTAA TTAGTGATGG GCAAATCCAC CGACAATATT TGGCAGTAGT GGAGGGTGAA
ATGGCCCAGA GTGGAAAGCT CGATTGGGCA ATTGGACGTA ATCCAGTAAA TCCCCATCTT
CATCAAGTGA ACGGGCAAAA CGCGCAGCCA GCCTTGACAT ATTATGAAAC ATTGGCAAGT
AATCATGAAC GTTCCTTAGT GAAACTTCGC TTAGCAACTG GCCGTACGCA CCAACTTAGG
GTTCATTTGG CGCATAGTGG CCATCCGATT GTTGGTGATC CGCTTTATAA TCCTTCGTCA
ACAGAAGGGA TGCTGCTTCA TGGTGTGTCG CAAAAACTCA TATTACCTTT CGTAATGAAA
TCTTTAAATA TTAGTGCGCC ATTACCATCG TATTTTAAAA ATTATTTGGT AAAATATAAC
TTAGCTAAAA AGCAAATTTA A
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| Protein sequence | MKYRWQIHEK LADNQVPKPL RKLLHDQWLL PNRLIHYLRI RRTVLVNGNY RSMNEIVEKN
DNIQLLFCGD EIRTPTANDY IPSSQSHLEV LYENRDLLVV NKPRGQKTHP NYHGETGTLM
NDVAGYLAHS QNNAYMVHRI DLQTSGAVIV AKNPIVVPIL NRLISDGQIH RQYLAVVEGE
MAQSGKLDWA IGRNPVNPHL HQVNGQNAQP ALTYYETLAS NHERSLVKLR LATGRTHQLR
VHLAHSGHPI VGDPLYNPSS TEGMLLHGVS QKLILPFVMK SLNISAPLPS YFKNYLVKYN
LAKKQI
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