Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_1817 |
Symbol | |
ID | 5189625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 1870760 |
End bp | 1871755 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640591662 |
Product | hypothetical protein |
Protein accession | YP_001272393 |
Protein GI | 148545023 |
COG category | [R] General function prediction only |
COG ID | [COG2984] ABC-type uncharacterized transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00011469 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGAA TGTATAGTTT AATTGCAATT ATTATCGCTT TCCTTTGTTT CGCATTTTTT AGGGAAAACA ATGGGTTCGT AACTAAGCAA CGAATTCCAA AAGTTGGTGT ATTAACCTTA ATGCACCACC CAGCGTTAGA TGAAATTTAC AAAGGATATG TTGATGAATT AGCAAAGGAA GGTTACCACA ACGGTAAGAA TATCAAGATT GAGTATCAAA ACGCGAATGG TGACCAAAGT AATCTTAAAA CAATGGCTTC AAAACTCGTT GATGATAACT CAACTGTTCT TTTTGGAATT ACGACCCCTG CTGCTCAAGC ATTAGCTAAT TCTACTACCA AAACACCAAT TGTACTTGGT GCTGTTACCG ATCCAAAAGC AGCGGGACTA GTTAAAAATA ATCAACACCC TGGCGGCAAT ATCACCGGAG TATCTGACCA AGCACCAATT CGCGAACAAC TCAATTTGAT CAAGCAATTC ATGCCGCGAA TGAAAACACT GGGAGTCATC TACACTTCAA GTGATGCTTC AGCAGTAGCC GGTTACCACC AAATCAAGCG TGAATGTCGT AAGATGAATA TTAACTTAAA GGCTTATTCA ATTGCCAACA GTAACGACTT AAACCAGGTT TCCGAACAAA TGCTTAGCCA GGTTGATGCA GTAATTGTAC CAACAGATAA TACGATCGCT GGGGCAATGC AAACCTTAGT TAAGAATGCC GATGCCGCTA ACAAACCAGT CTTCCCAGCA ACTGACACAA TGGTTAAGCA AGGTGGCGTT GCAACTTACA GTGTTAACCA ACGCGCTCTA GGTGTCCAAG GTGCAAAGAT GACGGTCGCA ATCCTCAAAG GCAAGTCAAA GCCAGCTGAT ACCCCAATTA AATACATGAA GCATGGGACT CCTGTTCTCA ACATTAAACA GGCTCGAAAA CTTAATTTAC AAATTCCCGC TCAATTTGAA AAGGATGCAG AAACGAAAGG AGAGGTTTAC AAATGA
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Protein sequence | MKRMYSLIAI IIAFLCFAFF RENNGFVTKQ RIPKVGVLTL MHHPALDEIY KGYVDELAKE GYHNGKNIKI EYQNANGDQS NLKTMASKLV DDNSTVLFGI TTPAAQALAN STTKTPIVLG AVTDPKAAGL VKNNQHPGGN ITGVSDQAPI REQLNLIKQF MPRMKTLGVI YTSSDASAVA GYHQIKRECR KMNINLKAYS IANSNDLNQV SEQMLSQVDA VIVPTDNTIA GAMQTLVKNA DAANKPVFPA TDTMVKQGGV ATYSVNQRAL GVQGAKMTVA ILKGKSKPAD TPIKYMKHGT PVLNIKQARK LNLQIPAQFE KDAETKGEVY K
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