Gene Lreu_1817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1817 
Symbol 
ID5189625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp1870760 
End bp1871755 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content41% 
IMG OID640591662 
Producthypothetical protein 
Protein accessionYP_001272393 
Protein GI148545023 
COG category[R] General function prediction only 
COG ID[COG2984] ABC-type uncharacterized transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00011469 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGAA TGTATAGTTT AATTGCAATT ATTATCGCTT TCCTTTGTTT CGCATTTTTT 
AGGGAAAACA ATGGGTTCGT AACTAAGCAA CGAATTCCAA AAGTTGGTGT ATTAACCTTA
ATGCACCACC CAGCGTTAGA TGAAATTTAC AAAGGATATG TTGATGAATT AGCAAAGGAA
GGTTACCACA ACGGTAAGAA TATCAAGATT GAGTATCAAA ACGCGAATGG TGACCAAAGT
AATCTTAAAA CAATGGCTTC AAAACTCGTT GATGATAACT CAACTGTTCT TTTTGGAATT
ACGACCCCTG CTGCTCAAGC ATTAGCTAAT TCTACTACCA AAACACCAAT TGTACTTGGT
GCTGTTACCG ATCCAAAAGC AGCGGGACTA GTTAAAAATA ATCAACACCC TGGCGGCAAT
ATCACCGGAG TATCTGACCA AGCACCAATT CGCGAACAAC TCAATTTGAT CAAGCAATTC
ATGCCGCGAA TGAAAACACT GGGAGTCATC TACACTTCAA GTGATGCTTC AGCAGTAGCC
GGTTACCACC AAATCAAGCG TGAATGTCGT AAGATGAATA TTAACTTAAA GGCTTATTCA
ATTGCCAACA GTAACGACTT AAACCAGGTT TCCGAACAAA TGCTTAGCCA GGTTGATGCA
GTAATTGTAC CAACAGATAA TACGATCGCT GGGGCAATGC AAACCTTAGT TAAGAATGCC
GATGCCGCTA ACAAACCAGT CTTCCCAGCA ACTGACACAA TGGTTAAGCA AGGTGGCGTT
GCAACTTACA GTGTTAACCA ACGCGCTCTA GGTGTCCAAG GTGCAAAGAT GACGGTCGCA
ATCCTCAAAG GCAAGTCAAA GCCAGCTGAT ACCCCAATTA AATACATGAA GCATGGGACT
CCTGTTCTCA ACATTAAACA GGCTCGAAAA CTTAATTTAC AAATTCCCGC TCAATTTGAA
AAGGATGCAG AAACGAAAGG AGAGGTTTAC AAATGA
 
Protein sequence
MKRMYSLIAI IIAFLCFAFF RENNGFVTKQ RIPKVGVLTL MHHPALDEIY KGYVDELAKE 
GYHNGKNIKI EYQNANGDQS NLKTMASKLV DDNSTVLFGI TTPAAQALAN STTKTPIVLG
AVTDPKAAGL VKNNQHPGGN ITGVSDQAPI REQLNLIKQF MPRMKTLGVI YTSSDASAVA
GYHQIKRECR KMNINLKAYS IANSNDLNQV SEQMLSQVDA VIVPTDNTIA GAMQTLVKNA
DAANKPVFPA TDTMVKQGGV ATYSVNQRAL GVQGAKMTVA ILKGKSKPAD TPIKYMKHGT
PVLNIKQARK LNLQIPAQFE KDAETKGEVY K