| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1766 |
|---|
| Symbol | |
|---|
| ID | 5188221 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | + |
|---|
| Start bp | 1818335 |
|---|
| End bp | 1819771 |
|---|
| Gene Length | 1437 bp |
|---|
| Protein Length | 478 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640591611 |
|---|
| Product | 6-phosphogluconate dehydrogenase |
|---|
| Protein accession | YP_001272342 |
|---|
| Protein GI | 148544972 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0362] 6-phosphogluconate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00873] 6-phosphogluconate dehydrogenase, decarboxylating |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000000232976 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGATC AAAAAGCACA AATTGGTGTT GTTGGTTTAG CTGTTATGGG TAAGAACCTT
GCACTAAACA TCGAAAGTCG TGGCTTCACG GTTGGTGTAT ACAACCGTCA CCGTAACCGT
ACTGACGATA TGATGCGTGA CCACAGCGAT AAGAAGTTAG TACCTAGCTA CACTGTTAAG
GAATTTGTAG ACTCACTAGA AAAGCCTCGT CGGATTCTTA TGATGGTTAA GGCCGGTAAG
CCAACTGATG CTCTTATCGA CGAATTATTG CCATTACTTG ACAAGGGTGA TGTTTTAATC
GATGGTGGTA ACACTAACTT CCACGATACT ATGGCTCGTA ACGCTAAGTT AGACAAGTCT
GGTATCAACT TCATCGGAAT GGGTGTTTCC GGTGGTGAAT TAGGTGCCCT TCACGGTCCT
TCACTTATGC CAGGTGGTCA AAAAGAAGCT TATGACTTAG TTGCTCCAAT CCTTACTAAG
ATTGCTGCTA AGGCTGAAGA AGATGGCAAG CCATGTGTTG CTTACATTGG ACCAAACGGT
GCTGGTCACT ATGTTAAGAT GGTTCACAAC GGTATCGAAT ACGGTGATGA AGAATTAATC
GACGAAAGTT ACAACATCAT GCGTAACGTA TTAAAGATGC CTGTTGATGA CATTGCTAAG
ACTTTTGCTG AATGGAACAA GGGTGAATTA AGCAGTTACC TTGTTGACAT TACTGCTGAT
ATCCTTACTC GTAAGGATGA CCTTGGTGAC GACAAGAGCA AGCCTATTGT TGACATGATC
CTTGACCGTG GTGCTAACAA GGGTACTGGT AAGTGGAGTT CAATGACTGC CCTTGATGGT
GGTGCTCCTC AATCAGTTAT TACAGAAGCT GTTTACGCTC GTTACATTTC AATGATGAAG
GACGAACGTG TACAAGCAAG CAAGGAATTG CCTGTTGAAA CTGAAGCTAT TTCAATCGAT
GACAAGAAGG AAATGATTGA AAAAGTACGT CAAGCTCTTT ACTTCGGTAA GCTTATGAGT
TACGCACAAG GTTTCGAACA AATGCGGATC GACTCCGAAC ATTACGACTG GAACCTTAAG
TATGGTGAAT TAGCTCAAAT CTGGCGTGCA GGATGCATTA TTCGTGCACA ATTCTTACAA
AACATTACTG ATGCCTTCAC TAAGAACCCA GACTTGAAGA ACTTGCTTCT TGATGATTAC
TTCAAGGATA TTGCTAAGAA GTACCAAAAG GCAACTCGTG ACGTTGTTGC TCTTGCTGTT
AAGGCTGGTA TTCCTGTTCC TTCACTTAGC GCTGCTATTA GTTACTACGA CTCATACCGT
TCAGAAGTGC TTCCTGCTAA CTTGCTTCAA GCTCAACGTG ACTACTTCGG TGCTCACACT
TACGAACGTA CTGACCGTCC TGGTAACTTC CACTACAGCT GGTACGAAGA ACAATAA
|
|---|
| Protein sequence | MSDQKAQIGV VGLAVMGKNL ALNIESRGFT VGVYNRHRNR TDDMMRDHSD KKLVPSYTVK
EFVDSLEKPR RILMMVKAGK PTDALIDELL PLLDKGDVLI DGGNTNFHDT MARNAKLDKS
GINFIGMGVS GGELGALHGP SLMPGGQKEA YDLVAPILTK IAAKAEEDGK PCVAYIGPNG
AGHYVKMVHN GIEYGDEELI DESYNIMRNV LKMPVDDIAK TFAEWNKGEL SSYLVDITAD
ILTRKDDLGD DKSKPIVDMI LDRGANKGTG KWSSMTALDG GAPQSVITEA VYARYISMMK
DERVQASKEL PVETEAISID DKKEMIEKVR QALYFGKLMS YAQGFEQMRI DSEHYDWNLK
YGELAQIWRA GCIIRAQFLQ NITDAFTKNP DLKNLLLDDY FKDIAKKYQK ATRDVVALAV
KAGIPVPSLS AAISYYDSYR SEVLPANLLQ AQRDYFGAHT YERTDRPGNF HYSWYEEQ
|
|---|
| |