Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_1750 |
Symbol | |
ID | 5188667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 1803280 |
End bp | 1804359 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 640591595 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001272326 |
Protein GI | 148544956 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 56 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACGAAT ATTCTTCAAA ATTCTTGAAT GACATTCAAA AGGTAACAAA AACATTTCAG GAAATAACCA ATAATAATAT AATTTTCACA AGCATTACCG GAGCAATTGT TGATTGCAAC ACCCTTCTTT TTGACTCAAA TATTTCACTT GAACATTTAC GAAAACTCGA TTTTAAAAAT TACTTTGTTT TTCCACTAGT TATAAGCTCA TCTTTAAGTG GTTTCTTTGT TCTTGATGAA TCACATATAG AATCAGACGC TATTGATTTA TGTAGTAAAT ATATTGAAAT TTCTTGCAAA AATTTTATTG ACAGTTCCAA TGACTGCATA GCTGTCCTTA CCCCATTCGA GGCTCCTAAG CTAAGTTCAC TAATCAAAGT CCTTAATGGG ATTTTGAATA TTTCTGGAGA TGATTCAATA GCTAACGTTA CTAATCCTCC TATTCTTAAT AACAGAAATG ATGGTACTCT AAGTGATATT GAAAAAAATA TAACCATGGC GCTTAAATAC ATTAATTCCA ATTTAGAAAA ATCGCTTACT TTAGAAAACG TTTCTCAAAG GATTTATCTC TCACCATCAT ACTTAAGTCG AATCTTTAAA AATTATTTTA ATGACAATTT TATTAACTAT ATAAATCTAC AAAAAATTGC ACTTGCTCAA GAAAAATTAA TTTTTTCAAA TACACCAATT AATAAATTGG CTCATCAAGT TGGTTTTTCA CAGACAAGTT ACTTTACTAA AATTTTCAAG CAAAAAGTAG GAATGACACC ATCAAAGTAT CGAAAATATA ATTCCGCAAT AAAGAAAATC TATACTATTC CAAGAGATTT ACAATGGCGC TCAAATAAGT CCGTTTATGA AATCTCAAAA GATTTTTTCA ATAAAAATGA TATTTCCTTT AAAGCCCGTG ATTTAAATGG GTATCCATAT ATCTATTCAA TAAATGATCT GAATGATGTT AGTAATAAAG CAGGTTGGGT CTATACAGTA GATTGTTCTC AACCTATTAT TCCAGCTAGT GAGATTAATG TATTTGATCG TTCAGTAATT CAATGGATTT ATACTGAAAA AATTATTTAA
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Protein sequence | MYEYSSKFLN DIQKVTKTFQ EITNNNIIFT SITGAIVDCN TLLFDSNISL EHLRKLDFKN YFVFPLVISS SLSGFFVLDE SHIESDAIDL CSKYIEISCK NFIDSSNDCI AVLTPFEAPK LSSLIKVLNG ILNISGDDSI ANVTNPPILN NRNDGTLSDI EKNITMALKY INSNLEKSLT LENVSQRIYL SPSYLSRIFK NYFNDNFINY INLQKIALAQ EKLIFSNTPI NKLAHQVGFS QTSYFTKIFK QKVGMTPSKY RKYNSAIKKI YTIPRDLQWR SNKSVYEISK DFFNKNDISF KARDLNGYPY IYSINDLNDV SNKAGWVYTV DCSQPIIPAS EINVFDRSVI QWIYTEKII
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