Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_1747 |
Symbol | |
ID | 5189036 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | - |
Start bp | 1800230 |
End bp | 1801906 |
Gene Length | 1677 bp |
Protein Length | 558 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640591592 |
Product | glycerol dehydratase |
Protein accession | YP_001272323 |
Protein GI | 148544953 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4909] Propanediol dehydratase, large subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACGTC AAAAACGATT TGAAGAACTA GAAAAACGGC CAATTCATCA AGATACATTT GTTAAAGAAT GGCCAGAAGA AGGTTTCGTT GCAATGATGG GGCCTAATGA CCCTAAGCCT AGTGTAAAAG TTGAAAATGG CAAGATCGTA GAGATGGATG GTAAAAAGCT CGAAGATTTT GATTTGATTG ACTTGTACAT TGCTAAGTAT GGAATCAATA TTGACAACGT TGAAAAAGTT ATGAATATGG ATTCTACCAA GATTGCACGG ATGCTTGTTG ATCCTAATGT TTCTCGTGAT GAAATTATTG AAATTACATC AGCTTTGACT CCTGCTAAGG CTGAAGAGAT CATCAGTAAG CTTGATTTTG GTGAAATGAT TATGGCTGTC AAGAAGATGC GCCCACGTCG TAAGCCTGAC AACCAGTGTC ACGTTACCAA TACTGTTGAT AACCCAGTTC AAATTGCTGC TGATGCTGCT GATGCCGCTC TTCGTGGATT TCCAGAACAA GAAACCACGA CAGCTGTGGC ACGTTATGCA CCATTCAATG CTATTTCAAT TTTAATTGGT GCACAAACAG GTCGCCCTGG TGTATTGACA CAATGTTCTG TTGAAGAAGC TACTGAATTG CAATTAGGTA TGCGTGGTTT TACCGCATAT GCTGAAACCA TTTCAGTTTA CGGTACTGAT CGTGTATTTA CCGATGGTGA TGATACTCCA TGGTCTAAAG GCTTCTTGGC ATCTTGTTAT GCATCACGTG GTTTGAAGAT GCGATTTACT TCAGGTGCCG GTTCAGAAGT TTTGATGGGT TATCCAGAAG GTAAGTCAAT GCTTTACCTT GAAGCGCGTT GTATTTTACT TACTAAGGCT TCAGGTGTTC AAGGACTTCA AAATGGTGCC GTAAGTTGTA TTGAAATTCC TGGTGCTGTT CCTAATGGTA TTCGTGAAGT TCTCGGTGAA AACTTGTTAT GTATGATGTG TGACATCGAA TGTGCTTCTG GTTGTGACCA AGCATACTCA CACTCCGATA TGCGGCGGAC TGAACGGTTT ATTGGTCAAT TTATTGCCGG TACTGATTAT ATTAACTCTG GTTACTCATC AACTCCTAAC TACGATAATA CCTTCGCTGG TTCAAACACT GATGCTATGG ACTACGATGA TATGTATGTT ATGGAACGTG ACTTGGGTCA ATATTATGGT ATTCACCCTG TTAAGGAAGA AACCATTATT AAGGCACGTA ATAAGGCCGC TAAAGCCCTT CAAGCAGTAT TTGAAGATCT TGGATTACCA AAGATTACTG ATGAAGAGGT CGAAGCAGCA ACGTATGCTA ACACCCATGA TGACATGCCA AAGCGGGATA TGGTTGCAGA TATGAAGGCT GCTCAAGATA TGATGGATCG TGGAATTACT GCTATTGATA TTATCAAGGC ATTGTACAAC CACGGATTTA AAGATGTCGC TGAAGCAATT TTGAACCTTC AAAAACAAAA AGTTGTTGGT GATTACCTTC AAACATCTTC TATTTTTGAT AAAGATTGGA ACGTCACTTC TGCTGTTAAC GACGGAAATG ATTATCAAGG ACCAGGTACT GGATACCGTC TATATGAAGA CAAGGAAGAA TGGGATCGGA TTAAAGACTT ACCATTCGCC CTTGATCCAG AACATTTGGA ACTGTAG
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Protein sequence | MKRQKRFEEL EKRPIHQDTF VKEWPEEGFV AMMGPNDPKP SVKVENGKIV EMDGKKLEDF DLIDLYIAKY GINIDNVEKV MNMDSTKIAR MLVDPNVSRD EIIEITSALT PAKAEEIISK LDFGEMIMAV KKMRPRRKPD NQCHVTNTVD NPVQIAADAA DAALRGFPEQ ETTTAVARYA PFNAISILIG AQTGRPGVLT QCSVEEATEL QLGMRGFTAY AETISVYGTD RVFTDGDDTP WSKGFLASCY ASRGLKMRFT SGAGSEVLMG YPEGKSMLYL EARCILLTKA SGVQGLQNGA VSCIEIPGAV PNGIREVLGE NLLCMMCDIE CASGCDQAYS HSDMRRTERF IGQFIAGTDY INSGYSSTPN YDNTFAGSNT DAMDYDDMYV MERDLGQYYG IHPVKEETII KARNKAAKAL QAVFEDLGLP KITDEEVEAA TYANTHDDMP KRDMVADMKA AQDMMDRGIT AIDIIKALYN HGFKDVAEAI LNLQKQKVVG DYLQTSSIFD KDWNVTSAVN DGNDYQGPGT GYRLYEDKEE WDRIKDLPFA LDPEHLEL
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