| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1723 |
|---|
| Symbol | |
|---|
| ID | 5189024 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | - |
|---|
| Start bp | 1782022 |
|---|
| End bp | 1783110 |
|---|
| Gene Length | 1089 bp |
|---|
| Protein Length | 362 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640591568 |
|---|
| Product | L-threonine O-3-phosphate decarboxylase |
|---|
| Protein accession | YP_001272299 |
|---|
| Protein GI | 148544929 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 63 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAAAATA ATATTCATCA TGGTGGGAAT ATCGAGCAAG TTGCTACTCA ATTGAATATT
CCTATTGAAG AGGTTAAAGA CTTTAGTGCA AATATTAATC CTCTGGGGTT TCCGTCAGAT
TTATGGAACG TATTAGTTCA ATCATTTGCT AATATTGAAG TCTATCCAAA TCCAGAGTAT
CCAGAATTGA AAGCAGCAAT CGCTAATCAT TTTAATGTCA ATAGTGATGA TGTGTTTGTC
GGTAATGGAG CATCGGAAGT CTTGGATGAG ACAATTCGAG CAGAAAAGGC AACGGATGCG
TTAGTCCTAG CGCCTACGTT TGGTGAATAT GAGCGACTTT TTAAGCGTGT TGGAATAAAA
GTTCACCATT ATCAATTATA CGAAAAAAAT AATTTTTCAT GTGATGTACA GGCGATGATT
GAACAACTAA AAGCGCATCG TGAAATTACA ATTATTTGTT TAGCAAGTCC TAACAATCCA
ACTGGTCAAA TAATAGCACT AAAAGATCTT CGGAACTTAG TTAACTTTTG TAATCAACAT
CATCGCCTTT TGATCTTGGA TGAAGCCTTT ATTGACCTAA CTGTTAACGA ACAAGAAAGT
CTTATTAATG AACTTGAAGC TGACGACCGT GTTTATATTA TCCGGGCGGC TACTAAATTT
TTTGCAATTC CAGGATTAAG ATTGGGATAT TGTATTACAA AAAATAAAAA ATTAAAGACT
TTACTTAAAG TTCAAGAAAA CACTTGGTCG GTAAATGGGA TTGCGGATGT TTTTGGTCAA
AATATGTTTA GAGCAAAAAA ATATATTAAA TTAACTCATG ATTGGTTAAA TATTCAGCAA
CCTGCACTAT ATCAAGCGTT ACAAGCAATA CCTGAAATAA AGGTTTTTCC AAGTGCTACT
AACTTCTTTT TATTTAAAAG CAATGATTTG GAATTAAGAG AAAAGCTTAT TCGTCACCGT
ATTTTGATTC GCCAATGTGA TGATTACGCT GGGCTGGGCC GACAATACTA TCGAGTGGCA
GTTAAGGGCC CACAAGATAA TATTCTATTA GTCAAGACAT TAAAACAAGT GTTAGGACGT
GAGCTGTAA
|
|---|
| Protein sequence | MKNNIHHGGN IEQVATQLNI PIEEVKDFSA NINPLGFPSD LWNVLVQSFA NIEVYPNPEY
PELKAAIANH FNVNSDDVFV GNGASEVLDE TIRAEKATDA LVLAPTFGEY ERLFKRVGIK
VHHYQLYEKN NFSCDVQAMI EQLKAHREIT IICLASPNNP TGQIIALKDL RNLVNFCNQH
HRLLILDEAF IDLTVNEQES LINELEADDR VYIIRAATKF FAIPGLRLGY CITKNKKLKT
LLKVQENTWS VNGIADVFGQ NMFRAKKYIK LTHDWLNIQQ PALYQALQAI PEIKVFPSAT
NFFLFKSNDL ELREKLIRHR ILIRQCDDYA GLGRQYYRVA VKGPQDNILL VKTLKQVLGR
EL
|
|---|
| |