Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_1707 |
Symbol | |
ID | 5188873 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | - |
Start bp | 1768799 |
End bp | 1769476 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640591552 |
Product | cobalt ABC transporter, inner membrane subunit CbiQ |
Protein accession | YP_001272283 |
Protein GI | 148544913 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters |
TIGRFAM ID | [TIGR02454] cobalt ABC transporter, permease protein CbiQ |
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Plasmid Coverage information |
Num covering plasmid clones | 54 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGAGTA TCGATAAATA TGCTTATGAA AATCGAATTG TTAATTGGTC GCCAAAGTTA AAAGCTTTTT TATGGTTAGT AGGAATGGTT TTAGCTTTCC AGCCAATTCA ATGGATTAAA GTAATTGTCC TATTTACAGT AGCAGGTATC ACCATTTACG TAACTAATGT TTCATTTAAG CGTTATATTA GTTGGTTTTA TGCAATTATT CCTTTTGTAG TTTTAAGTAT CATTGGAATT GTTGTAACTA TTTCTTCTCA ACGCTCTACC CTTATTGGAC CGATAAAACT TGGAAATGTT TATCTTGGAT TGGCAAAAGT AATGATGCCT AAAGCTGGGC AGGTAGCATT GCAATGTATG ACAGCAATTG TCTGTACGTA CTGGTTTGCG TTAACAACCC CATTTATTCA AATTTTACAG GTACTAAAAG CTATGCATCT GCCACGAGTA ATGATTGAAG TAACGATGCT AATGTATCGT TTCATCTTTA TCTTTATTGA TGCTTTTGAG CAGATTCACC GTGCTCAACG ATTACGGTTC GGCTATGACT CTTTTAGTTT AATGATTCAT TCATCTGGAA TTTTAGCAAA AATGTTATTT GAACAAGTCA TTATAAATTA TCAAATGATG ACTAAAGCAC TCGATGCTAA GCTATATAAT GGTGATTTTT ATCTTTAG
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Protein sequence | MLSIDKYAYE NRIVNWSPKL KAFLWLVGMV LAFQPIQWIK VIVLFTVAGI TIYVTNVSFK RYISWFYAII PFVVLSIIGI VVTISSQRST LIGPIKLGNV YLGLAKVMMP KAGQVALQCM TAIVCTYWFA LTTPFIQILQ VLKAMHLPRV MIEVTMLMYR FIFIFIDAFE QIHRAQRLRF GYDSFSLMIH SSGILAKMLF EQVIINYQMM TKALDAKLYN GDFYL
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