Gene Lreu_1679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1679 
Symbol 
ID5189790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp1737170 
End bp1739098 
Gene Length1929 bp 
Protein Length642 aa 
Translation table11 
GC content43% 
IMG OID640591524 
Producttranslation elongation factor 2 (EF-2/EF-G) 
Protein accessionYP_001272255 
Protein GI148544885 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0480] Translation elongation factors (GTPases) 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAACAAA TTGTTACTGG CATCGTTGCT CATGTCGATG CTGGAAAAAC GACTTTAACC 
GAAGCCCTCA TGTATAAAAC CGGCGCTATT CGAAAGCTAG GCCGTGTGGA TAATGGGGAT
GCTTTTTTAG ATCCTAATAC GCTCGAAAAA CAGCGCGGAA TCACTCTTTT TACCCATCAA
GCTGAACTAA CCTACAATGA CCTTGTGCTT ACCCTTCTCG ATACCCCGGG GCACGTCGAT
TTTACTAGTC AAACAGAACA AGTCTTACCA GTTCTTGATT ATGCAATTCT TGTCGTTTCA
GCCACTGATG GTATTCAGGG ATACACGCGC ACATTATGGG ATCTTCTTGC GCGTTATGAT
ATCCCGACTT TCATTTTCAT TAACAAAGAA GACGTGATTG GTGCTGATTC TAGCGGTGTT
ATCGAGCAAC TGCAAAAAGA ATTTTCGCCA GCTTGCCTTG ATTTTGCTGA TCCATTAACT
GATGAAGTTC ATGAAACAAT TGCCATGCAG GATGATACAG TTTTAGAAAA CTACCTCAGT
ACTGGCAGTC TTAGCGATCA AACAATTCAA CAATTGATTA AACAACGTAA AGTGTTCCCT
TGTTATCGTG GAGCAGCCCT AAAGCTAACT GGAATCACTA ATTTCTTAAA GGGACTTGAG
AAATGGACTG TTACGCCTGA GTTCGCTGAT GAATTTACAG CGCGGGTATT TAAGATTTCC
CATGATGACA AGGGCAACAG ACTTAGTTGG GTTCGCGTAT TCGGTGGCAA AATTCCAGCT
AAATCAGTTT TGTTAAATGA AGAAAAAGTG AACCAAATTC GAATATATAA CGGGGCTAAA
TTTACCCCGA GTCAGGTTTT AAGTGCTGGT CAAGTCGGTG CTCTTACTGG ATTAACTTCT
ACATCCCCTG GACTTGGTCT TGGTAAAACA AAGCCACTCC CGGCACCAGT TATAAAACCA
GTCTTAAATT ATGCCGTTAA AGTTGATAAA GAGGACCTTC ATGCTTGTCT CAACGCCTTA
AAAGAGCTTG AAGATGAAGA TCCACAACTA CAGATCTCTT GGCATCCTCA CATCCAAGAG
ATTCACGTTC AGATTATGGG AGAAGCTCAA CTTCAGATTC TGCAACAATT GCTTCAAGAA
CGTTACCAAT TAAAAGTTAC ATTTGATGAG GGAAACGTTC TATATCAAGA AACGATTACT
AACAAAGTTG AAGGGGTCGG TCACTTTGAA CCATTACGTC ACTATGCCGA AGCCCACCTT
CTTTTAGAAC CGGGAAAACA AGGCTCTGGA ATTACAATTA GCAGTGATTG CAGTCTTGAT
ATCCTTGATC GCAATTGGCA ACACCAGATC TTAACTAGTT TACAGGCCAA AGAACATTTA
GGGGTTCTTA CAGGAGCTCC CCTTACCGAT GTCAAAATCA CCCTCATTGG TGGTCGCGGC
CATATTAAAC ATACAGTTGG TGGAGATTTT CGTCAGGCTA GTTGGCGAGC GGTTCGCCAA
GGATTGATGG AATTAAAGGG ACAAAACGGA TGTCAATTAT TAGAACCTTG GTATGCTTTC
CACCTTAAAG TCCCGAATGA CCAAGTAGGA CGCGCAATTA ATGACATTCA ACAAATGCAT
GGTACGTTCG AGCTTGATGA AGCTAATAGT CAAGCCCTAA CCCTGATTAC GGGAACCGCT
CCTGTTGTGG GCATGCGCGA CTACGCCCAA AGCGTTCGCG CCTACACTCA CGGCCAGGGT
CAGCTCGAGC TTGTTGTTGC TGGCTATTAT CCATGTCATA ATGCTGAAGA TGTTATTAGA
GATGTTAATT ATGATCCGGT TGCTGACCTA GAAAACACTC CTGATTCCGT CTTCTGTGCG
CATGGTGCTG GTTTCCCCGT TCCGTGGAAT GAAGTCCCAA CAATGGCGCA TTATCCATAT
AGAAAATAG
 
Protein sequence
MKQIVTGIVA HVDAGKTTLT EALMYKTGAI RKLGRVDNGD AFLDPNTLEK QRGITLFTHQ 
AELTYNDLVL TLLDTPGHVD FTSQTEQVLP VLDYAILVVS ATDGIQGYTR TLWDLLARYD
IPTFIFINKE DVIGADSSGV IEQLQKEFSP ACLDFADPLT DEVHETIAMQ DDTVLENYLS
TGSLSDQTIQ QLIKQRKVFP CYRGAALKLT GITNFLKGLE KWTVTPEFAD EFTARVFKIS
HDDKGNRLSW VRVFGGKIPA KSVLLNEEKV NQIRIYNGAK FTPSQVLSAG QVGALTGLTS
TSPGLGLGKT KPLPAPVIKP VLNYAVKVDK EDLHACLNAL KELEDEDPQL QISWHPHIQE
IHVQIMGEAQ LQILQQLLQE RYQLKVTFDE GNVLYQETIT NKVEGVGHFE PLRHYAEAHL
LLEPGKQGSG ITISSDCSLD ILDRNWQHQI LTSLQAKEHL GVLTGAPLTD VKITLIGGRG
HIKHTVGGDF RQASWRAVRQ GLMELKGQNG CQLLEPWYAF HLKVPNDQVG RAINDIQQMH
GTFELDEANS QALTLITGTA PVVGMRDYAQ SVRAYTHGQG QLELVVAGYY PCHNAEDVIR
DVNYDPVADL ENTPDSVFCA HGAGFPVPWN EVPTMAHYPY RK