| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1602 |
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| Symbol | |
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| ID | 5188262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | - |
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| Start bp | 1656024 |
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| End bp | 1657091 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640591448 |
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| Product | peptidoglycan-binding LysM |
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| Protein accession | YP_001272179 |
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| Protein GI | 148544809 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000032696 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTTAA GTAAGAAGCA ACTAGCAGCT ACTTTTATGA CTGCTGTTTT AGCGGGATCA
GTAATGATTG GCTCTGTGGT AACTACTGAG GCTGATAATG CCAGTGGATC ACCAGAAGAG
CAAGCGGATA TTACTAATTG GATTGCCAAT ACCCCCGAAC AAATTTCTAA TAATATGGCG
ATGCAACACA TTAATACCAA TAACCTTAAT GGCACTCGTT ACATTATTCA ATGGGGTGAC
ACTTTATCGG GGATCTCAGC CGCAACTGGA ATTTCTGTGG CTAAACTTTG CTACGATAAC
AACATTCAAA ATGCTAATTT AATCTTTGCT GGGGATGTTC TTATCTTAAA CCGTGAAGGA
AGCGTTCCTG CTGGTTATGA TCCCAACGTA AATCCGAATG TTGTTGCCCA GACAAAGATT
ACAATCAATA ATGGCCCAAC AACAGTGAAT ATTGCCGTTC AACCACAATC TGTTGTTAAG
AATTACGATA ATTCCGACAA TTCTGATCAT TCGACAACAA TTTACAAGGC AGGCGCGGTA
AATTCATTTA ACAACAACGA CAATGATAAT GAACAAAGTG CTAGTCAATC CAGCTCAACT
AAGTCTGCTA AGCATCAGAA GCATACTTCA TCAGTCAGTG CTTCTGACAT TGTGAGCGGC
TTGAATGATG CCAATAATAA TGACAAACTG TCCTTTGACG AAGGGGATGG GGGTAGTGAC
GCTGATGAAC TTAATGTTGA TTCAGCAGCT ATCTTAAAGG ATGCTAAGAA GAATGACTAT
GATGCGATCC TTAGTGAAAT CGAAAGTGCC CTAGGTTCAA AAGCCAAGAA GGATACGACA
GTTTACATTG AAAAAGATGG CAACGAGATC CATGTCTACG CTAGTGTTAA TGATGACGCT
GATAGCAGCA ATAGTAGCAG CAATAAGGAT GATGAAGATA GCGATAGCAG CAGTAGTAGC
GAAAGTGAAA GCAGCGATGA CAGCAGTCAA AGCAGCAGTG ATGATGAAGA TAGCAACAGT
CAAGCTACTA CAAGTGACCA CGACACCGAC ACTTCTGACG ATGAGTAA
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| Protein sequence | MKLSKKQLAA TFMTAVLAGS VMIGSVVTTE ADNASGSPEE QADITNWIAN TPEQISNNMA
MQHINTNNLN GTRYIIQWGD TLSGISAATG ISVAKLCYDN NIQNANLIFA GDVLILNREG
SVPAGYDPNV NPNVVAQTKI TINNGPTTVN IAVQPQSVVK NYDNSDNSDH STTIYKAGAV
NSFNNNDNDN EQSASQSSST KSAKHQKHTS SVSASDIVSG LNDANNNDKL SFDEGDGGSD
ADELNVDSAA ILKDAKKNDY DAILSEIESA LGSKAKKDTT VYIEKDGNEI HVYASVNDDA
DSSNSSSNKD DEDSDSSSSS ESESSDDSSQ SSSDDEDSNS QATTSDHDTD TSDDE
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