Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_1528 |
Symbol | |
ID | 5189035 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | - |
Start bp | 1581341 |
End bp | 1582228 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640591379 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001272110 |
Protein GI | 148544740 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATACTC GTGATTTACA ATACTTTGCC ATGTTAGTTA AATTAAAAAA TTATACGCAA GTAGCAAAGT ATTTTAATGT TTCTCAACCT AGTATTACCC AGGCAATTCG TCGCCTTGAG CAAGAATTTG ACACAAAATT AGTGCGCAAA GATCGTGTTC ATAGGGATGA AATGATTACG CGCAGTGGGC AGTTACTATA TGAAAAAGCG TTGGCGATAA ACAAAAAAAT AGATATTGCC CATCAAGAAA TAGCACGGTC CGATCAACGA CAAATAAAAT TCGGTCTTCC GCCAATCATT GGAAAAATGT ATATTTCACA CATTATCGGC AATCTTTCTA AGCAGCTTCT TCAACGAATA AAAATCGTTT CTGTGGGGTC TCATGAATTG CTAAGTGAAT TACAAGCAGG AAAGATCGAT ATTGCCATGC TGGGGTCAAT TGCGCCAATT GATCAAACCG GTATTTTTGC GGAATTAATA ACTGCGCGAC CATTTAGTAT CATCGTAAGT GCTGATCATC CGCTTGCAAA GAAAAAGGCA GTTAGTTTTC AAGACTTAAC GAACGAAATC TTTATTAATT ATGACCAGCA ATATGTGCAT AAAGCTGCCT TCCAAGCTTA TTCTACCTAT GCCCAAATTA ATCCACAAAC GGCAATTTAT AAGGTGCCAA ATGTTTCCTG GATTAAAGAG TTGGTACGGC AAAATAAGGG AATTAGTTTG ATGGTTAAAG ATGCGGTAAA GGATGAACCA GGAATTGTTG CCCTCGATAT TAAAGACCCA ATTCCGGAAA AGTTTTTTAT TTCGCTTGCC ACACGGGAGG ATTACATTTT AAGCGATGAT GAACAGCAAT TAATCACTAA ATTAAAAGAA ATTACTCCCA TCGCTTGA
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Protein sequence | MNTRDLQYFA MLVKLKNYTQ VAKYFNVSQP SITQAIRRLE QEFDTKLVRK DRVHRDEMIT RSGQLLYEKA LAINKKIDIA HQEIARSDQR QIKFGLPPII GKMYISHIIG NLSKQLLQRI KIVSVGSHEL LSELQAGKID IAMLGSIAPI DQTGIFAELI TARPFSIIVS ADHPLAKKKA VSFQDLTNEI FINYDQQYVH KAAFQAYSTY AQINPQTAIY KVPNVSWIKE LVRQNKGISL MVKDAVKDEP GIVALDIKDP IPEKFFISLA TREDYILSDD EQQLITKLKE ITPIA
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