Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_1495 |
Symbol | |
ID | 5188312 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | - |
Start bp | 1548199 |
End bp | 1548666 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640591341 |
Product | transcriptional repressor, CtsR |
Protein accession | YP_001272078 |
Protein GI | 148544708 |
COG category | [K] Transcription |
COG ID | [COG4463] Transcriptional repressor of class III stress genes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000000151028 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGAATA AAAGTATTTC AGATATTATC GAAGCATACT TAAAAGAAAT ACTTGGTGAC TCAGCTCAGG TCGAAATTCG TCGTTCTGAG ATTGCCAACC AGTTTGATGT GGTACCGTCA CAAATTAATT ATGTTATTAA AACGAGGTTT ACCATTCAAA ATGGTTATTT AGTAAAGAGT AAGCGTGGAG GCGGCGGATA CATTCGAATC GAGCGAGTTA ATTTACTTGA TGACGTAAAT GTGCTAAACT CACTTATTCA AGCAATTGGC GACTCGGTTC GTGAACGTGA TGCTTTTGAT ATTGTTCGAA CGTTATATGA AGAAGACGTG ATTACGAGAC GTGAAGGAGA CCTTATGCTT GTTGCATTAT CTAAACAAGC ATTAGCAGTT AATGATAGTA AGGTTGAAGA TCAACTTCGC GCCCGGATAT TAGTATCATT CTTGAATCGA CTTCGCTATG AAAGTTAA
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Protein sequence | MENKSISDII EAYLKEILGD SAQVEIRRSE IANQFDVVPS QINYVIKTRF TIQNGYLVKS KRGGGGYIRI ERVNLLDDVN VLNSLIQAIG DSVRERDAFD IVRTLYEEDV ITRREGDLML VALSKQALAV NDSKVEDQLR ARILVSFLNR LRYES
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