Gene Lreu_1488 details

Gene Information

• Locus tag: Lreu_1488
• Symbol: rpsL
• ID: 5188446
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Lactobacillus reuteri DSM 20016
• Kingdom: Bacteria
• Replicon accession: NC_009513
• Strand: -
• Start bp: 1534635
• End bp: 1535054
• Gene Length: 420 bp
• Protein Length: 139 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 640591334
• Product: 30S ribosomal protein S12
• Protein accession: YP_001272071
• Protein GI: 148544701
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0048] Ribosomal protein S12
• TIGRFAM ID: [TIGR00981] ribosomal protein S12, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.00000000000142047
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCAACCA TTAACCAATT GGTACGTAAA GGCCGTAAGA GCCACAAGGG CAAGTCAAAG 
TCACCAGCTC TTGGTTATGT TTACAACACT TTCAAGAAAG AAGAAATTAA GACTCCATCA 
CCACAAAAAC GTGGAGTTGC TACTCGTGTG GGTACTATGA CTCCTAAGAA GCCTAACTCA 
GCTTTACGGA AGTATGCCCG TGTACGTCTT TCAAACTTAA TCGAAGTTAC TGCTTACATT 
CCTGGTATTG GACACAACCT CCAAGAACAC TCAGTTGTTT TAATTCGTGG TGGTCGTGTT 
AAGGATTTAC CTGGGGTTCG TTACCACATC ATCCGTGGTA CTCTAGATAC TGCTGGTGTT 
GAAGGCCGTA TGCAATCACG TTCTAAGTAC GGTGCTAAGA AGCCTAAGAA TAAGAAGTAA 

 

Protein sequence

MPTINQLVRK GRKSHKGKSK SPALGYVYNT FKKEEIKTPS PQKRGVATRV GTMTPKKPNS 
ALRKYARVRL SNLIEVTAYI PGIGHNLQEH SVVLIRGGRV KDLPGVRYHI IRGTLDTAGV 
EGRMQSRSKY GAKKPKNKK