| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1459 |
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| Symbol | rpsM |
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| ID | 5189953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | - |
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| Start bp | 1517805 |
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| End bp | 1518170 |
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| Gene Length | 366 bp |
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| Protein Length | 121 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640591305 |
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| Product | 30S ribosomal protein S13 |
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| Protein accession | YP_001272042 |
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| Protein GI | 148544672 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0099] Ribosomal protein S13 |
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| TIGRFAM ID | [TIGR03631] 30S ribosomal protein S13 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000000000394716 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCTCGTA TTGCAGGTGT CGATTTACCT CGTGACAAGC GAATCGTAAT CGGCTTAACA
TATATTTTTG GTATTGGTGA TTCTACTGCT AAGAAGATTC TTGAAAATGC TGGTGTATCA
GAAGATATCC GTGTTCGTGA TTTGACTCCA GATCAAGAAG AAAAAATTCG TGCACAAGTA
GATCAAATTC AAGTTGAAGG TGATTTACGG CGTGAAGTTT CAATGAACAT CAAGCGTCTT
CAAGAAATTG GATCATACCG TGGTATGCGT CACCGTCGTG GCCTACCTGT TCGTGGTCAA
CATACTAAGA ACAATGCTCG TACTCGTAAG GGTAAAGCTG TAGCTATCGC TAATAAGAAG
AAGTAA
|
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| Protein sequence | MARIAGVDLP RDKRIVIGLT YIFGIGDSTA KKILENAGVS EDIRVRDLTP DQEEKIRAQV
DQIQVEGDLR REVSMNIKRL QEIGSYRGMR HRRGLPVRGQ HTKNNARTRK GKAVAIANKK
K
|
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