| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1442 |
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| Symbol | gatC |
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| ID | 5189842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | - |
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| Start bp | 1502013 |
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| End bp | 1502330 |
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| Gene Length | 318 bp |
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| Protein Length | 105 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640591288 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit C |
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| Protein accession | YP_001272025 |
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| Protein GI | 148544655 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0721] Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit |
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| TIGRFAM ID | [TIGR00135] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00132357 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCCAGTA AAATCACTGA GCAACAAGTA GAACACGTTG CTGAACTTGC TAAGCTTGAG
TTCCCTAAGG ATGAACTTGG TAAGTTTACC ACTCAACTAG GAAACATTAT TGATATGTTT
GAAGACCTCG AAGCGGTTGA TACCGATGGC GTTGAACCAA TGACATCAGC AACCGATCGG
GTAAATGTAA TGCGTGAAGA TAAGGCAGTT AAGAGTTCTA AAGACGAACA AGAAGCCTTG
CTTAACAATG CTCCTGAAAC TGATGGTGGC TACATCAAGG TTCCAGCAAT TCTTGACGAA
AGTGAGGACG GCGAATAA
|
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| Protein sequence | MASKITEQQV EHVAELAKLE FPKDELGKFT TQLGNIIDMF EDLEAVDTDG VEPMTSATDR
VNVMREDKAV KSSKDEQEAL LNNAPETDGG YIKVPAILDE SEDGE
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