Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_1382 |
Symbol | |
ID | 5189267 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | - |
Start bp | 1440758 |
End bp | 1442263 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640591230 |
Product | amino acid permease-associated region |
Protein accession | YP_001271968 |
Protein GI | 148544598 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.320464 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGACGAAC AGAGTAGTAA TAAAAAGATG ATTACTACCT TTGGACTAGT GACGATGATC ATTACCGCCA TTTTTGGTTT TGGGAATGTT TCAAACGCCT ACTTACAAAT GGGTTACGGT AGTATTATTT GGTACGCATT AGCAGGGATT TGTTTCTTCT TTCCTTGTGG CTTGATGATG GCAGAGTACG GTTCCACATT TAAGGATGCT AAAGGGGGAA TTTATTCCTG GCTTGCCGGC TCAGTTGGTG AACGAGTCGC TTTTGTCGGT ACTTTCGTAT GGTTAGCATC TTGGATTGTA TGGATGGTAT CAACGGCATC ACGGATTTGG ATTACTTTTT CTGCCTTGCT TTTTGGTAAG GATACTACCC AACAATGGCA CGCATTTGGT CTGACCTCGA CTCAATTGAT TGGGGTCCTT GGAATTCTAT TGATTCTTGG GACAACTTGG TGTAGTTCAC GGGGAATGAC CGCCATTGCT AAAGTTGGTT CACTTGGTGG TATTTTTACA ATTGTTGTTA ACATTATCTT TGTTATTGTC AGCGTTATTG TTTTAGTCGC CGATAAGGGA ATCTTAAAGC AATCAATTCA TGGGGCTTCA ACTTTCATTA CATCGCCTAA TCCACAATTC CAGACACCAA TTGCTATTAT TTCATTTGTT GTTTATGCTA TTTTTGCTTA CGGTGGGATG GAATCATTAG GGTCCGTTAC TGATAGTATG AAAAATCCTG AAAAGACTTT CCCTCGTGGA TTGATCATTG CAAGTATCTT TACGATTGGT ACTTATGTTT TAATGATTTT TATGCTTGGT TGGTCAGTAA ATTATCAACA AACTTTGACT AAGAGCAGCG TTAACCTTGG TAATGTTACC TATGTTGTCT TTAATCAATT AGGGGTTACC ATGGGGGATG CACTTGGATG GTCGCACGGT GCTGCCCTTA CTTTTGGACT TATTATGACG CGGATCGTTG CCTTTGCACA GACTCTTGGT TTCTTGGGTG CATTGTTTAT CCTGCTTTAC TCCCCAATCA AGGCCTTCAT TCTTGGATCT AATCCAGACT TATGGCCAAA GAAGCTTACG AAACTTAATA AGGCGGGGAT GCCTGCGAAT GCAATGTGGC TTCAAGCAAT TATTGTTTCA ATTATTGTTT TCTTGGTTGC CTTTGGTGGC AATGCTGCTC AACAGTTCTA CTTGATTTTG ACTGATATGG CGAACGTTTC AACTTGTTTC CCATATATTT TCTTGATCGG GGCTTTCCCA TTCTTTAAGG CGAAGAAGAA CCTTGACCGG CCATTCGTTG TCTTTAAGAA CCGTTTCTGG ACAGATGTAT TAGTATGTTT CGTTGAATTG ATTTTAATTG TCGGAATCGT CTTTACGTTT GTTCAACCAC TATTACAAAA AGATTATCAA ACAGCTTTCT GGACACTTGC GGGACCAATC TTCTTTGCAA TCGTTGCATT GGTTTTCTAT CAAATCTCCG CAAAGCGTCA TAATATTGCT GAATAA
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Protein sequence | MDEQSSNKKM ITTFGLVTMI ITAIFGFGNV SNAYLQMGYG SIIWYALAGI CFFFPCGLMM AEYGSTFKDA KGGIYSWLAG SVGERVAFVG TFVWLASWIV WMVSTASRIW ITFSALLFGK DTTQQWHAFG LTSTQLIGVL GILLILGTTW CSSRGMTAIA KVGSLGGIFT IVVNIIFVIV SVIVLVADKG ILKQSIHGAS TFITSPNPQF QTPIAIISFV VYAIFAYGGM ESLGSVTDSM KNPEKTFPRG LIIASIFTIG TYVLMIFMLG WSVNYQQTLT KSSVNLGNVT YVVFNQLGVT MGDALGWSHG AALTFGLIMT RIVAFAQTLG FLGALFILLY SPIKAFILGS NPDLWPKKLT KLNKAGMPAN AMWLQAIIVS IIVFLVAFGG NAAQQFYLIL TDMANVSTCF PYIFLIGAFP FFKAKKNLDR PFVVFKNRFW TDVLVCFVEL ILIVGIVFTF VQPLLQKDYQ TAFWTLAGPI FFAIVALVFY QISAKRHNIA E
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