Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_1367 |
Symbol | |
ID | 5188327 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | - |
Start bp | 1426106 |
End bp | 1427530 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640591215 |
Product | mannosyl-glycoprotein endo-beta-N-acetylglucosamidase |
Protein accession | YP_001271953 |
Protein GI | 148544583 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1705] Muramidase (flagellum-specific) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.000955772 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGATTG CAACATTGGC AAGTACAATG GTAATGTTCA CTACTGCAAA TGCTGATACA AATGCGAATA ATTCTAGTGA AGAATCAGTT AATAATGCAG TACAAACAGA AGTTACCACC AACAACATTA CGACTAATAA TGAAGTCCAG CTAGTTACTG CTACGCCTAA AAGTAGTGAT GAAGTAGCTT CAAATAATGC TAATGAAAAT TCAAATAATG TACATGTAAA TGTAACAAGT GATAACACAC AGACTGATGA GGATATTAGT CAATTTACAC CAATCCAACC ACAAGCAGCA CAGGTGAAAA ATGGTTGGAT TAAGGAAAAT AATCAGTGGA CATATTATGA AAATGGTGAT GTAACATCTG GTCGCAATTA TTCATATCTT CCTACTATTA ATGGTACTGG TAATAACTGG TATTTAGTTG ATAATGGTGT TGTCCAATCT GGTGTCCAAA AGTGGGCTGG CACATACTAT GATTTTGATC CAAATACTTA CTTACGAGTA GATAATAACT ATGTACAGTC ACAATGGGGG ATGTGGTATC TATTTGGCAA TGATGGGCAA ATTCAAACCG GTGTCCAAAA GTGGGCTGGT AGCTACTATT ATTTTGATCC AAGTACGTAT TTACGAGTAG ATAACGACTA CCGTCAATCT CAATGGGGGT TATGGTATAT GTTTGGTAAT GATGGACGGA TTGCCACTAA AGTATATCAA TGGGCCGGTA GTTATTATTA CTTTGATCCC AATACTTACT TACGAGTAGA TAATGATTAT CGTCAATCTC AATGGGGTGA TTGGTATCTC TTCGGTGGTG ATGGGCGTGT ACTATCTGGC CTTCAAAAGT GGGCTGGTAG CTATTACTAT TTTGATCCAA GTACATATTT AAAGGTAACT AATAAAAATA TTACGGTAGC TGGACTAAAC CTTCATGCCG ATAGTACAGG GATTATTTCA GGAATTAATC GGAATACTAA TTTCCTATTA AGTATCCATG ATGCGGCTTT AGATGGCTGG CGACAATTCG GTGTATTGCC ATCTGTAACT GCAGCTCAAG CTATTCTTGA AAGTGCTTGG GGTCAATCTG CTCTTGCTAC ACAAGGACAT AATTTGTTTG GTATTAAAGG TAGCTATAAT GGTCAGTCAA TTGTTATGAG AACTGCTGAA TATGGTACTG GTGGTTATTA TTACATTAAT GATGCATTTC GGAAATATCC AAGTAATTAT GAGAGTGTAG TTGACCACGG GCGTTTCCTT GCTACTAATA AACGATACAG CAATCTTTTG TGGAAGAAAG ACTATGCTAC TGTTACAAAT TATTTACATG CTGATGGTTA TGCAACAGAT CCTAAATATG CTTCTAGTTT AAATAATGTT ATTCGAACAT ATAATTTAGA GGCTTGGGAC AAAGAAGTAT TTTAG
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Protein sequence | MAIATLASTM VMFTTANADT NANNSSEESV NNAVQTEVTT NNITTNNEVQ LVTATPKSSD EVASNNANEN SNNVHVNVTS DNTQTDEDIS QFTPIQPQAA QVKNGWIKEN NQWTYYENGD VTSGRNYSYL PTINGTGNNW YLVDNGVVQS GVQKWAGTYY DFDPNTYLRV DNNYVQSQWG MWYLFGNDGQ IQTGVQKWAG SYYYFDPSTY LRVDNDYRQS QWGLWYMFGN DGRIATKVYQ WAGSYYYFDP NTYLRVDNDY RQSQWGDWYL FGGDGRVLSG LQKWAGSYYY FDPSTYLKVT NKNITVAGLN LHADSTGIIS GINRNTNFLL SIHDAALDGW RQFGVLPSVT AAQAILESAW GQSALATQGH NLFGIKGSYN GQSIVMRTAE YGTGGYYYIN DAFRKYPSNY ESVVDHGRFL ATNKRYSNLL WKKDYATVTN YLHADGYATD PKYASSLNNV IRTYNLEAWD KEVF
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