| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1364 |
|---|
| Symbol | |
|---|
| ID | 5188191 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | - |
|---|
| Start bp | 1421973 |
|---|
| End bp | 1423235 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640591212 |
|---|
| Product | NLP/P60 protein |
|---|
| Protein accession | YP_001271950 |
|---|
| Protein GI | 148544580 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.123178 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCATTTG CCACAGTAGC TAGTATCGTT GGATTAGCTA CATCAGCAAA TGCAGATGAC
GTAAACACTA CTACAACATC TACTGTACAA ACTACCCAAG TAGCTGAAGA AACTCCTGCT
ACTAGCACTT CAGATGCAGC AAGTTCTGCT GTACAATCTA ATTCGGTAGA TGCCGCTGAA
CAAACCACTA ATGTTGATAC AAATGTTGCT AGTCCGGCAG TTACACCAGT ACAGCCACAA
GACACCCAGC AAAAAAATGG TTGGGTAAAT GAAAACAATG ACTGGACATA TTATCAAAAT
GGTGAGGTAA CATCAGGACG TGACTATACT TATTTACCAA CAATCAACGG AGAAGGTAAT
AGTTGGTACT TAGTTGATAA CGGTGTTGTT CAATCAGGAG TACAACAGTG GGCTGGTTCA
TACTATGACT TTGATGCGAA CAATAATTAT CAACGTGTAG ACAATAATTA TGTACAATCC
CAATGGGGAA TGTGGTACCT CTTTGGCAAT GATGGTCGTA TTCAAACGGG AGTACAGCAA
TGGGCCGGTT CATACTATTA TTTTGATCCA AGTACTTACC TTCGTGTAGA TAATGATTAC
CGTCAATCCC AATGGGGTGA CTGGTATCTC TTTGGCAATG ATGGTCGTAT TCAAACGGGA
GTACAGCAAT GGGCTGGTTC ATACTATTAT TTTGATCCAA GTACTTACCT TCGTGTAGAT
AATGATTACC GTCAATCCCA ATGGGGTGAC TGGTATCTCT TTGGCAATGA CGGACGGATT
CTTTCAGGGC TTCAAAGTTG GAAAGGTCAG ACTTACTACT TTGACCCAAC TACTTTCAAG
AAGGTAGTTA ATCAAGATGT AACGGTTAAT AACGTGAAAT ATCATTTAGA TGCTAATGGT
ATTGCCAAAC AAGTGTCTAA TGTTGATGCT AAAGTTAACC GTGCATTATC CCAACGTGGT
GTTCCTTACG TATGGGGAGG AAATACTCCG GCTGGCTTTG ATTGCTCTGG GTTAGTTCAA
TGGGCTTATG GTTTAGGTTC AGCTTATCGA ACAACTTACC AGCAAGCTAC TTTAGGTGCT
CATAAGCGTG ATGTAATGAA TGCTCCAAAG GGTTCATTAC TATTCTTTGG TAGTGATGGC
GCTCCATATC ATGTAGCTAT TTCTCTTGGT AATGGTACTT ATGTTCACGC ACCAGAGCCA
GGTGATGTTG TAAAGATTGG TTATTCAAAA TACTTCACAC CAAGTTTCTA CATCAATATG
TAA
|
|---|
| Protein sequence | MAFATVASIV GLATSANADD VNTTTTSTVQ TTQVAEETPA TSTSDAASSA VQSNSVDAAE
QTTNVDTNVA SPAVTPVQPQ DTQQKNGWVN ENNDWTYYQN GEVTSGRDYT YLPTINGEGN
SWYLVDNGVV QSGVQQWAGS YYDFDANNNY QRVDNNYVQS QWGMWYLFGN DGRIQTGVQQ
WAGSYYYFDP STYLRVDNDY RQSQWGDWYL FGNDGRIQTG VQQWAGSYYY FDPSTYLRVD
NDYRQSQWGD WYLFGNDGRI LSGLQSWKGQ TYYFDPTTFK KVVNQDVTVN NVKYHLDANG
IAKQVSNVDA KVNRALSQRG VPYVWGGNTP AGFDCSGLVQ WAYGLGSAYR TTYQQATLGA
HKRDVMNAPK GSLLFFGSDG APYHVAISLG NGTYVHAPEP GDVVKIGYSK YFTPSFYINM
|
|---|
| |