Gene Lreu_1348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1348 
Symbol 
ID5189318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp1402329 
End bp1403210 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content33% 
IMG OID640591197 
ProductNLP/P60 protein 
Protein accessionYP_001271935 
Protein GI148544565 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00998708 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTTTA CTAAGGGCAA TATAAAATGG TACTCAGCAT TATTTTCATG TAGTGTATTT 
CTTATTGGTT CGATAAGTAT TGTAAATGCT GATGAGTCTA ATCCAAATAA TCAAATGCAA
CAATCTGCTG TATTAGTATC TGATAAAACT AATAATAGTC AGAATAATAA TTTAGTAAAG
AAGGATGAGA ATAATCAGAC ATCTGATCAA CAGATTAATA TGCAGGTAAC ACCTTCTTCT
AATTTTCAGT CAGTAAATTT AGTTCAGAGT CAAGCTGCTA CAAATGGAGT AGTTAACGAA
AATGGTAATA ATTATTACTA TCAAAATGGT CAAAGGCAAA CTAATTACTT TTTAAACCAA
AATAATAAAG TTTACTATTT CGATAATAGT GGGGTCATGT ATCAGAACAA GTGGTATTAC
AATTGGGGAC ATTCGTATTA CTTTAAATCT GATGGTACTC GTGCAACTAA TGAAACATTG
ATAATCGATG GTACTAGCTA TTATTTTGAT AACGAAGGAA TTGCTCATTC AAATAAGGCA
TCACAAGTTG TTTCAATTGC TAAACAACCT GTGATGCCTT ATGTTTGGGG AGCTATCGGG
CCCAATTCAT TTGATTGTTC AGGACTAGTT CAATATGTAT ATCGACAAGT GGGCATAAGT
TTGTCACGAA CAACCTATCA ACAAGAGTAT CAGGGTAAAG CGGTTAGTCT AAATTCATTA
CAGCCAGGTG ACCTTCTTTT CTGGGGAAAT TACGGGAATG CCTATCATGT TGCAATTTAC
ATTGGCGATG GCAACTTTAT CCAGGCACCT ACGAAAGGAC AAAATGTAAA GATAACTAAT
ATTAAATATT ATCATCCAAC TTTTGCAAGA AGAATTTTAT AA
 
Protein sequence
MKFTKGNIKW YSALFSCSVF LIGSISIVNA DESNPNNQMQ QSAVLVSDKT NNSQNNNLVK 
KDENNQTSDQ QINMQVTPSS NFQSVNLVQS QAATNGVVNE NGNNYYYQNG QRQTNYFLNQ
NNKVYYFDNS GVMYQNKWYY NWGHSYYFKS DGTRATNETL IIDGTSYYFD NEGIAHSNKA
SQVVSIAKQP VMPYVWGAIG PNSFDCSGLV QYVYRQVGIS LSRTTYQQEY QGKAVSLNSL
QPGDLLFWGN YGNAYHVAIY IGDGNFIQAP TKGQNVKITN IKYYHPTFAR RIL