Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_1348 |
Symbol | |
ID | 5189318 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | - |
Start bp | 1402329 |
End bp | 1403210 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640591197 |
Product | NLP/P60 protein |
Protein accession | YP_001271935 |
Protein GI | 148544565 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00998708 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTTTA CTAAGGGCAA TATAAAATGG TACTCAGCAT TATTTTCATG TAGTGTATTT CTTATTGGTT CGATAAGTAT TGTAAATGCT GATGAGTCTA ATCCAAATAA TCAAATGCAA CAATCTGCTG TATTAGTATC TGATAAAACT AATAATAGTC AGAATAATAA TTTAGTAAAG AAGGATGAGA ATAATCAGAC ATCTGATCAA CAGATTAATA TGCAGGTAAC ACCTTCTTCT AATTTTCAGT CAGTAAATTT AGTTCAGAGT CAAGCTGCTA CAAATGGAGT AGTTAACGAA AATGGTAATA ATTATTACTA TCAAAATGGT CAAAGGCAAA CTAATTACTT TTTAAACCAA AATAATAAAG TTTACTATTT CGATAATAGT GGGGTCATGT ATCAGAACAA GTGGTATTAC AATTGGGGAC ATTCGTATTA CTTTAAATCT GATGGTACTC GTGCAACTAA TGAAACATTG ATAATCGATG GTACTAGCTA TTATTTTGAT AACGAAGGAA TTGCTCATTC AAATAAGGCA TCACAAGTTG TTTCAATTGC TAAACAACCT GTGATGCCTT ATGTTTGGGG AGCTATCGGG CCCAATTCAT TTGATTGTTC AGGACTAGTT CAATATGTAT ATCGACAAGT GGGCATAAGT TTGTCACGAA CAACCTATCA ACAAGAGTAT CAGGGTAAAG CGGTTAGTCT AAATTCATTA CAGCCAGGTG ACCTTCTTTT CTGGGGAAAT TACGGGAATG CCTATCATGT TGCAATTTAC ATTGGCGATG GCAACTTTAT CCAGGCACCT ACGAAAGGAC AAAATGTAAA GATAACTAAT ATTAAATATT ATCATCCAAC TTTTGCAAGA AGAATTTTAT AA
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Protein sequence | MKFTKGNIKW YSALFSCSVF LIGSISIVNA DESNPNNQMQ QSAVLVSDKT NNSQNNNLVK KDENNQTSDQ QINMQVTPSS NFQSVNLVQS QAATNGVVNE NGNNYYYQNG QRQTNYFLNQ NNKVYYFDNS GVMYQNKWYY NWGHSYYFKS DGTRATNETL IIDGTSYYFD NEGIAHSNKA SQVVSIAKQP VMPYVWGAIG PNSFDCSGLV QYVYRQVGIS LSRTTYQQEY QGKAVSLNSL QPGDLLFWGN YGNAYHVAIY IGDGNFIQAP TKGQNVKITN IKYYHPTFAR RIL
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