Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_1336 |
Symbol | |
ID | 5188226 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | - |
Start bp | 1390653 |
End bp | 1391207 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640591191 |
Product | cell wall binding repeat-containing protein |
Protein accession | YP_001271929 |
Protein GI | 148544559 |
COG category | [R] General function prediction only |
COG ID | [COG5263] FOG: Glucan-binding domain (YG repeat) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 60 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCGGTC ACGATGGCCG CATTGTTACT AAAGTTTACC AATGGGCTGG CACGTATTAC TACTTTGATC CGAATACTTA TTTGCGAGTA GATAATGATT ACCGTCAATC TCAGTGGGGC GATTGGTATA TGTTTGGCCC AGATGGTCGT ATCGTTACAG GGTTAAAGGA ATGGTACGGT AGTTATTATT ACTTTGATCC GACGACTTAC TTAAAAGTAA CTAATAAGTG GATAGATAAT AAGTACTTTG GTCCAGCTGG TCAGCAAGCT ATTTCACGCT TTGAGAGACT TGATAATAAG TATTACTATT TCGATGCTAA TGGGGCAGTT CTTAATATCC ATGATCAATT TAAGAATATT GATAACCACA CTTATTACTT TGGAGCTGAT GGTGCTTGTT ATACCAGTCA ATTCTTAAAT AAGGATGGTA AACAGTATTA TTTCGATAAT GATGGAATTA TGCTCACTGA TCAAGAGAAG ATCATTGACG GTAAATTCTA TCATTTCAAT GTTAATGGTG AAGCAATCCA AGTAAATGAT CCTTCTGAAA TTTGA
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Protein sequence | MFGHDGRIVT KVYQWAGTYY YFDPNTYLRV DNDYRQSQWG DWYMFGPDGR IVTGLKEWYG SYYYFDPTTY LKVTNKWIDN KYFGPAGQQA ISRFERLDNK YYYFDANGAV LNIHDQFKNI DNHTYYFGAD GACYTSQFLN KDGKQYYFDN DGIMLTDQEK IIDGKFYHFN VNGEAIQVND PSEI
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