Gene Lreu_1312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1312 
Symbol 
ID5188614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand- 
Start bp1358404 
End bp1359111 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content42% 
IMG OID640591154 
Productpeptidoglycan-binding LysM 
Protein accessionYP_001271906 
Protein GI148544536 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTTAT CTAAGAAAGT AGCCAAGATT ACAGCAGCGA TTACTGGTGC AGTTGCATTA 
GGAACAGTAG CTACTGCAAC GACTGCAAAC GCCGACAGTA TTTACACGGT GCAAGCAGGT 
GACACCCTTT CTGGGATTTC TTACAAATTA GGTCACGATC TAACTTTTGT AGATACATTA 
GCAAACAACA ATAATATTGC TGATAAGAAC TTGATTTACG TTGGTCAACA ATTAGTAATC 
AAGGATGATG GTGAAGTTGC ACCAGCTACT CAAGAAGAAG TTGCTACTTT ACCAGCCGCA 
AATGTTGCAC CACAAGCAGA TACACAAGCT ACACCTGCTG AAAATCAAGC ACAACAAAAC 
CAACAAGTAC AATCAAACCA AGAAGCACCA GTTGCTCAAC AACAAGTACA AACTCCACAA 
ACACAAAATG TACAACAACA ATCTAGTGCT CAAGCATCAA CTGGCTATAA CTCAAATGTA 
GCTGGAAATG ATGCTGCTGC CAAGGCTTGG ATCGCAGCTC GCGAATCAGG TGGTAGCTAC 
AGTGCACGGA ATGGTCAATA CATTGGTAAG TACCAATTGT CAGCATCATA CTTAAATGGT 
GACTACTCAG AAGCTAACCA AGAACGAGTA GCTGATCAAT ACGTAGCTAG TCGTTACGGT 
TCCTGGAGTG CTGCTCAATC ATTCTGGCAA TCACACGGTT GGTACTAA
 
Protein sequence
MKLSKKVAKI TAAITGAVAL GTVATATTAN ADSIYTVQAG DTLSGISYKL GHDLTFVDTL 
ANNNNIADKN LIYVGQQLVI KDDGEVAPAT QEEVATLPAA NVAPQADTQA TPAENQAQQN 
QQVQSNQEAP VAQQQVQTPQ TQNVQQQSSA QASTGYNSNV AGNDAAAKAW IAARESGGSY 
SARNGQYIGK YQLSASYLNG DYSEANQERV ADQYVASRYG SWSAAQSFWQ SHGWY