Gene Lreu_1292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1292 
Symbol 
ID5188390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp1338050 
End bp1338910 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content45% 
IMG OID640591134 
Productcarbohydrate kinase, YjeF related protein 
Protein accessionYP_001271886 
Protein GI148544516 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0063] Predicted sugar kinase 
TIGRFAM ID[TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.841389 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAAAAC TTACTGACCA AATCTTAAAG GATGTTATTA CTCCCCGTCC TGAAAACAGT 
TTTAAAGGTA CTTTTGGGAA AGTTACTCTT ATCGGCGGCA ATCGTAATTT TGGTGGCGCA
ATCATCATGG CATCAACCGC GGCCGTCTGT GCTGGTGCTG GGCTTGTAAC AACTGCTACT
GATGAAATCA ACGCTAGTGC CCTCCATGCG CAGTTGCCAG AAGCAATGTT CGCTGATTTT
ACTGATGATG CCCTAGTCGC TGACCTTACC CAAGCTGCTA CCAGTGTGGT CGTTGGGCCA
GGCCTCGGAA ATGATGGAAC AAGTTTACGA ATTTTGAAAA ATGTTTTTGC TCATACGACC
GAGAAACAAA ATGTGATCAT TGATGGATCT GCAATTACTC TTATGGCGAT GGAAAAGCTT
GAACAGCCAC AAGGAAATAT CATTTATACT CCACATGAAA TGGAATGGCA ACGACTCTCT
GGAATCAAGA TTGGCGATCA AACTGAAGAT AAGAACAAGG CAGCTCAAGA AAAACTCGGT
GCTACCGTTG TCTTAAAGAA GCACCACACA GAAATTTATA CTGATGACCA AGTATATCAG
TTGCCAATCG GTACCCCCGC CCAAGCAGTT GGTGGAATGG GTGATACTCT TGCCGGGATG
GTGGGAGGCT TCACTGCTGA ATTTAATGAA AAGGCAGATA AGGCCGTCCT CGCTGCAGTT
TATGCGCACA GTGCGATTGC GGAAAAGATC GCCGAAAGCC AGTATATCGT TCTCCCTCAC
CAAATTAGTC GTGCTCTCCC AGCCTTCATG AAAAAGATGG AAGGGATGGA TGAAGACCAC
CATATTGGAT TTTTGAATTA A
 
Protein sequence
MKKLTDQILK DVITPRPENS FKGTFGKVTL IGGNRNFGGA IIMASTAAVC AGAGLVTTAT 
DEINASALHA QLPEAMFADF TDDALVADLT QAATSVVVGP GLGNDGTSLR ILKNVFAHTT
EKQNVIIDGS AITLMAMEKL EQPQGNIIYT PHEMEWQRLS GIKIGDQTED KNKAAQEKLG
ATVVLKKHHT EIYTDDQVYQ LPIGTPAQAV GGMGDTLAGM VGGFTAEFNE KADKAVLAAV
YAHSAIAEKI AESQYIVLPH QISRALPAFM KKMEGMDEDH HIGFLN