Gene Lreu_1286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1286 
Symbol 
ID5188635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp1332295 
End bp1333311 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content38% 
IMG OID640591128 
ProductLacI family transcription regulator 
Protein accessionYP_001271880 
Protein GI148544510 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000013505 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA AAATAACAAT TCGTGATTTA GCAAAAGAAG CTGGTGTTTC TGTAACCACT 
GTTTCGCAAA TTTTAAATAA TAAAGGTGAT CGATTCAGTA CAGCAACTCA AGAACGAGTT
TTGGCATTAC GGGATAAGTA TAAATACGTT CCTGATTTTA ATGCTCGTAA CTTAATTTTA
AAGAGCGCCA AGACAATTGG GGTACTAGTT CCTAATATTG CCAACCCGTT TTTTGGTACT
TTTGTTGAAG GGGTACAGAG TATTGCTCGT GAAGCAGAAT TTATTCCGCT TGTCTTTAGT
GCCAACCGTG ACCCAAAGCT GGAAAAATAT TACCTTTCCC AGATGATTGA ACGATCAATT
AGTGGATTAG TAATTGCTAG TGCAACGATG ACTACTGAGA CAATTAAAGA GGTTATCTCC
TTTAATGAAA TTCCTTATAT TTTATTTGAC CAGAATCATA CGCAGGAGGG TGACCGGGTA
CAAACCAATG ATTACCTTGG TGGTCAAATT GCGGCTAAGC ACCTCATTGA ACTTGGTCAC
AAACATATTG CCGTTCTTAC TTCTGATAAT CCTACTGAAA ACTTAAATCA CCGAATGAAT
GGATTTAAAA ATATTATTAA AGAAAATAAT CTAAGCCTAG ATCCGATTCA CGATGTTATT
CGGGCACCCT TGACAAAGGA TGGCGGATAT AAAGCGGTAA AAGATGTTTT AGCAACTGGT
GCCTCTGCTG TTTTCGCGGC AAATGATGAA ATGGCAATTG GATTGTTGCG GGGGCTACAT
GAATTAGACG TTAAGGTTCC TGAAGATATT TCTGTGATTG GTTATGATAA CATCTACTGG
GATGATTATG TTTATCCCCG ATTAACTACG GTGCAACAGC CTATTTTTAA CCTCGGTGCG
GGAGCTACTA AAATGCTCAT TGAACAGATT AGTCATAGTA GTGCTGAAGC CCGTGTGCAA
AACTTTCCGG TAAAATTAAT TAAACGAGAT AGTACAAGTT CCTATCGTCC AAAATAA
 
Protein sequence
MKKKITIRDL AKEAGVSVTT VSQILNNKGD RFSTATQERV LALRDKYKYV PDFNARNLIL 
KSAKTIGVLV PNIANPFFGT FVEGVQSIAR EAEFIPLVFS ANRDPKLEKY YLSQMIERSI
SGLVIASATM TTETIKEVIS FNEIPYILFD QNHTQEGDRV QTNDYLGGQI AAKHLIELGH
KHIAVLTSDN PTENLNHRMN GFKNIIKENN LSLDPIHDVI RAPLTKDGGY KAVKDVLATG
ASAVFAANDE MAIGLLRGLH ELDVKVPEDI SVIGYDNIYW DDYVYPRLTT VQQPIFNLGA
GATKMLIEQI SHSSAEARVQ NFPVKLIKRD STSSYRPK