Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_1261 |
Symbol | |
ID | 5189154 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | - |
Start bp | 1309351 |
End bp | 1310553 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640591101 |
Product | ABC transporter EcsB |
Protein accession | YP_001271855 |
Protein GI | 148544485 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4473] Predicted ABC-type exoprotein transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000000013948 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAGT TATTTAGCAA GCGTCGCAGT CAACACTTTA TGCTCCTACT GCGTTACTGG CGGCTAGTCT TCAATGACCA CTTTGTTATC GCCTTATTTT TCCTGTTCGG AGCCTTGGCG TATGGCTACT CCCAATGGCT GCCAACCTTG GGATCGCATG AATGGTGGAC CCGGCTGATC TTGATCGGCT GGTTTACGGT CATCGCCCAA ATTGGTCGGC TTGCAACGCT GATCAAAAAG CCGGACCCAG TCTTTCTCTT GCCGCAAGTT GAAGGAATCC ATCGTTACCT TAACCAGGCG ACCTGGTATA GTTTGATCTT AGCGGAAATA ATGACGGTAG TGGGGGCCTT TATCGCCTTA CCGTTCGCAT TGACAACGGA AAAACTCAGC AGTGCCGAGA TTGTGACCAT CTTTTTAGTC GCCATTGTCA ATAAGGCTGA TTGGATGCAC GTAGCTCGTA AATCACTGAG TTTGCGCTGG GGTGATCAAC AGTGGCGGAC CCGGCTAGAA TACTGGGTAA ATCCGCTCCT TGCTTCAATC GCAATGTGGC TGGTAAATCC CTATGTCGGT CTTGTCGTGG CAGTGATCTT GTACTTGGCG GTAATTGTTT ATTATCGTGA TCTTGCCGTT AATTGGCGGA TTGCCGTTAA GGCGGAACAA GATCGGATGT ACAGTGTCTA CCGTTTCTTT AATCTCTTTA CCGATGTGCC AAGTGTTCAA GGAAATACCA AACGGCGGAA GTGGGCAGAT GGCTTGATTC GCTGGCTAAG CAAGGGTGAC CAACCATGGT CTTACTTATA CGCTCGCACA TTTGTCCGGA GTACCGAAGT GAGCGGGATT GTCAGTCGGT TGACCCTACT AGGAATGGTG ATTGTCTTCT TACTGCCAGC AGGTTGGCTA AGTACTCTGG TGGTCGTGCT CTTTATTTAC TTGATCGCGA CTCAGCTAAT GCCACTTTAT GACCAGTATG AATCGAATGT CTTTACCCAT ATCTATCCGA TTCCTGCTAG CCAGCAACAG GCAGACTTTA AGCAGCTATT AGCCAAGGTG ACGGCGCTTG AAGCATTATT GATCGCTCTT GCTAGTATCG GTTGGCAGTT GAACGTCGGC CAGATGGTAA TTAATCTTAT TATTGCGGCA GTGGAAGTGG TTTTATTAAG TCGTTTCTAC TTCAATGTCA GAGTCAAAAA ACTAATGAAA TGA
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Protein sequence | MNKLFSKRRS QHFMLLLRYW RLVFNDHFVI ALFFLFGALA YGYSQWLPTL GSHEWWTRLI LIGWFTVIAQ IGRLATLIKK PDPVFLLPQV EGIHRYLNQA TWYSLILAEI MTVVGAFIAL PFALTTEKLS SAEIVTIFLV AIVNKADWMH VARKSLSLRW GDQQWRTRLE YWVNPLLASI AMWLVNPYVG LVVAVILYLA VIVYYRDLAV NWRIAVKAEQ DRMYSVYRFF NLFTDVPSVQ GNTKRRKWAD GLIRWLSKGD QPWSYLYART FVRSTEVSGI VSRLTLLGMV IVFLLPAGWL STLVVVLFIY LIATQLMPLY DQYESNVFTH IYPIPASQQQ ADFKQLLAKV TALEALLIAL ASIGWQLNVG QMVINLIIAA VEVVLLSRFY FNVRVKKLMK
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