| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1228 |
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| Symbol | |
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| ID | 5190110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | - |
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| Start bp | 1278691 |
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| End bp | 1279377 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640591068 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001271822 |
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| Protein GI | 148544452 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00000325236 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTCGAA TTTTAATTAT TGAGGATGAG GAAAATTTAG CAAATTTTGT AGAACTTGAA
TTAAAGCATG AAGGCTACGA TACAGATGTT GAACTTGATG GTCGTGCCGG ACTAGAAGCA
GCTTTAAATC AAGACTTTGA CGTGATTTTG CTAGACTTGA TGCTCCCAGA GTTAAATGGG
ATTGAAGTTG CACGACGGGT TCGTGAAATA AAAGATACAC CAATTATTAT CATGACCGCT
CGTGATTCTG TTATTGACCG TGTCTCTGGT TTAGATCATG GGGCAGATGA TTATATTGTT
AAGCCATTTG CTATTGAAGA ACTCCTTGCA CGGGTGCGGG CGTTATTACG GCGAATCAGT
ATTGAAGATG GTAATAATAA AGAACACCAA ACAACGGTCA ATTACAAGGA TCTTACCATT
GAAAAAGAGA ATCGGGTCGT TCGTCGTGGT GATGAAGTAA TTAACCTTAC AAAGCGGGAA
TACGAATTAC TCTTGATTTT GATGGAAAAT ATCAATGTTG TTATGTCACG AAAAGACCTT
TTGAGTAAGG TGTGGGGTTA TGACTCCAAA GTTGAAACCA ATGTTGTTGA TGTTTATATT
CGGTACTTAC GGAATAAGAT CGACCGACCT GGTGAAAAGA GCTACATCCA AACGGTTCGT
GGTACTGGAT ATGTGATTCG CTCCTAG
|
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| Protein sequence | MSRILIIEDE ENLANFVELE LKHEGYDTDV ELDGRAGLEA ALNQDFDVIL LDLMLPELNG
IEVARRVREI KDTPIIIMTA RDSVIDRVSG LDHGADDYIV KPFAIEELLA RVRALLRRIS
IEDGNNKEHQ TTVNYKDLTI EKENRVVRRG DEVINLTKRE YELLLILMEN INVVMSRKDL
LSKVWGYDSK VETNVVDVYI RYLRNKIDRP GEKSYIQTVR GTGYVIRS
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