| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1219 |
|---|
| Symbol | |
|---|
| ID | 5189429 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | - |
|---|
| Start bp | 1270378 |
|---|
| End bp | 1270716 |
|---|
| Gene Length | 339 bp |
|---|
| Protein Length | 112 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640591059 |
|---|
| Product | HxlR family transcriptional regulator |
|---|
| Protein accession | YP_001271813 |
|---|
| Protein GI | 148544443 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1733] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000000000243781 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACAAT TAGTAGCAGA AAAGGCACTT GATGAAGACT GTAAACTTTG TCCAAAATTT
ACACGTACGT TTATGATCTT GGGAAAGAAA TGGAACGGAT TAATCATTGA AGTACTACTT
AAAAATGGCA ACATGCGATT TAAGGATATT GCCAGTAGCA TTGCAAAGTG CAGCGATCGA
GTCTTATGTG AACGATTAAA AGAACTCGAA GACGAACAAA TTGTTGTTCG GAACACTTAC
GAAAGTTCTA GTCGGGTAGA CTATTCGCTA ACTGAACGTG GTCAAGAATT GCGGCCAGTC
ATGGAAGCTG TTCACGCATG GAGTGACAAG TGGATTTAA
|
|---|
| Protein sequence | MEQLVAEKAL DEDCKLCPKF TRTFMILGKK WNGLIIEVLL KNGNMRFKDI ASSIAKCSDR
VLCERLKELE DEQIVVRNTY ESSSRVDYSL TERGQELRPV MEAVHAWSDK WI
|
|---|
| |