| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1208 |
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| Symbol | |
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| ID | 5189040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | - |
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| Start bp | 1257290 |
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| End bp | 1257949 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640591048 |
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| Product | rhomboid family protein |
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| Protein accession | YP_001271802 |
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| Protein GI | 148544432 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000000102271 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGGACGC AGGGACTAAG ATTAGCGCCC GTGACGCTTA CCTTAATAAT CTTTCAGGTA
TTAGTTTATT GCTGGTTAGT TTATGCAGGT GGCTCAACTA ATACAGTAAC CCTCCTGAAT
ATGGGGGCTC GTAGTACGCC CTTAATCAGG GAAGGTGAAT GGTGGCGCTT AGTATCACCT
GTGTTCCTTC ATGTTGGTTT ATCACACTTA GTAGTCAATA GCGTTACGCT TTTATATATC
GGCCGTTATA TTGAAGAATT TTTCGGTCAT TGGCGAATGG TAGTCATATA CTTTGTCAGT
GCGCTTTTTG GTAACTTTAC CAGCGCGGTC TTCATGCCAT CGACAATTTC AGCTGGTGCT
AGTACTGCTA TTTTTGGATT ATTTGGCGCA TTTTTAATGT TAGGCGTTTG TTTTCGCCAT
AACGTTATTG TTCGCGTCTT AAGTCGTACT TTTTTGTTAT TTGTTATTAT TAATATTGTG
ATGGATTTTT TCCTGTCAGG AGTTGACTTG ATAGGACATA TTGGCGGCCT TTTTGGTGGC
TTTTTCATTG CATTTATTGT TGGTGCTCCC ATGCTAGAAA CTGTTGATCA CCTAAAACAG
TTTTTAAGTG GAGCTGTATT AACGGTAAGT TTGGTAATTT TGACTCTAGA ATTGAAGTGA
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| Protein sequence | MRTQGLRLAP VTLTLIIFQV LVYCWLVYAG GSTNTVTLLN MGARSTPLIR EGEWWRLVSP
VFLHVGLSHL VVNSVTLLYI GRYIEEFFGH WRMVVIYFVS ALFGNFTSAV FMPSTISAGA
STAIFGLFGA FLMLGVCFRH NVIVRVLSRT FLLFVIINIV MDFFLSGVDL IGHIGGLFGG
FFIAFIVGAP MLETVDHLKQ FLSGAVLTVS LVILTLELK
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