Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_1173 |
Symbol | |
ID | 5188185 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | - |
Start bp | 1226656 |
End bp | 1229085 |
Gene Length | 2430 bp |
Protein Length | 809 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640591012 |
Product | replication restart DNA helicase PriA |
Protein accession | YP_001271767 |
Protein GI | 148544397 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAGAGT TGGCACAGGT AGTTGTTGAC GTTCCAACAA TGCAAACAAA CCAACCATAT ACTTATCAGA TTCCGCCAAA GCTTGAAAAA CAAATCCAGG TCGGGGTAAG AGTGATTGTG CCTTTTGGAA AGGGAAAACG GACTGTTCAA GGATTCGTTG TTGCCCTTGA CAATGCATCC CAATATGAGG GAGAACTTAA ACCAATTCAG GCGATAATGG ATCTTCAACC GGTAATTAAT CCTGAATTAA TGAATCTTAG CAAATGGTTG GCTGATACTA CTTATTCTTT TTGGATTTCT TGCTTATATA CGATGTTGCC TAACTTATTG AAGGCTAAGA CTACCAGAAT TATTCGAATT ATAGATGAAG TAGACGAACA TGTTGCCTTT GATATTTTTC ATGGTCGAGA TGAATTAGAG ATGGCGGCGG TACAAGATAA ACCGGCAATT TTAAGTGAAT TGTTCAAACT GCAAAAGGAA GGAAAGATAG CGATTGAATA CCAAGTGGAA GACCGGGCCA AGGCTAAAAC GGTGACTGGT ATTCGCTCTT TACTTAACTT TGAACAACTG GAAGATGAGC GCGCATCCCT TCATGCCAAT GCGCATGCTC AAAACCGCCT TCTTTCATAT TTACAATCAA TTGGCAGTCA AGTTGTTAAG CAAAAGGATG CTGAACATAA AACTGGTTTA AAAGCAGCCA CCTTCAATCA GGGACAACAG AAGGGATGGT TAGAGAAAAC ACCAGTTGAA GTATATCGAC AACCCTTGGC TATGCAGGTC ACTCCTGATG ATGCTCATTT AGCAGCCCCC CTGCAGCTCA ACGCCGATCA ACAAAATGCC GTTAACCAGA TTAATCAAGC AATCGACAAT CATGACCCTA AAGTTTTCCT CTTACAAGGA GTTACGGGGA GTGGCAAGAC AGAAGTATAC TTGCAATCGA TTGCTAATGC TCTTCAACAG GGAAAGACAG CATTAATGCT TGTACCTGAG ATTTCATTAA CTCCCCAGAT TGTTAACCGT GTGCGGCGAC GATTTGGTTC CAAGGTTGCT GTTTTACATA GTAGTTTATC AAACGGGGAA CGGTATGATG AATGGCGGCG GATTGAGCGA GGAGAAGCGC AAGTAGTTGT GGGTGCCCGT TCAGCAGTCT TTGCTCCATT GACCAATTTA GGGCTAATCA TTCTTGATGA AGAGCATGAA TCTAGTTATA AACAAGATGA ATCACCCCGT TATCAAGCGC GTGAAGTAGC TAAATGGCGG GGGAAATATA ATCAAGCGCC TGTAGTCCTT GGTTCTGCTA CTCCTAGTCT GGAGAGTCGT GCGCGAGCAG TAAAAAACGT TTATCACTTG TTGCGTCTTC CGCACCGGGT AAATAAACAG GAATTGCCGC CAATTGAAGT GGTTGATATG CGGGATGAAA TTAAAAAATA CGGGGAGAGT AACTTTTCGC AGAAACTATT AACCGACTTA AATGACCGCC TGCAAAAGAA CGAACAAAGT ATTTTAATGC TAAATCGACG GGGATTTTCG TCCTTTATGA TGTGTCGTGA TTGTGGAAAT GTCTTAAAGT GTCCGAATTG TGATATTTCT TTGACACTTC ACATGGATAC GCGGACAATG AAATGTCACT ATTGTGGTCA TGAAGAACCA ATCCCCCGTG AATGTCCCAA TTGCCATAGC CATCAGATTC GCTACTATGG GACCGGAACA GAGAAAGTTG AGCAAGAATT GCATCAATTA TTACCCCAAG CCCGGATTAT TCGCATGGAT GTTGATACCA CTCGGCGGAA GGGAATGCAT GCAAAATTAT TGCGACAGTT CGGTCAACAC CAAGCGGATA TTTTATTAGG AACCCAGATG ATTGCAAAGG GGCTTGATTT CCCTAATGTT ACCTTAGTAG GAGTCTTAAA TGCTGATACT GGTCTAGGCT TACCAGATTT TCGTGCTAGT GAACGGACTT TTGATTTGCT AAGTCAAGTT AGTGGTCGGG CTGGTCGGGC AAATAAGCAA GGAAAAGTTA TTATCCAGAC ATATAACCCC GATCATTACG CTATTCAAGA TGCCAAAACA CATGATTACG AAAAATTCTT TAACCAGGAA ATGATGCTGC GAAGACAAGC CAGTTATCCG CCATACTATT ACACCGTTCG TTTGATGGCT AGTCATCCTG AAGAAGCCAA AGCAGCTCGG GCAATGGCAG ATATTTATGG CCGCCTAAAG CAGGGATTAT TATCTTCGAC GGTTATTCTT GGCCCCACCC CGCGAGCGAT TGCCCGAATG AAGCGTCGTT ACTATTACCA AATTGTCATC AAATATAAGA AGGATCCGTA TTTGCATCAG CTATTGTTTG ATATTCTTCA GGATACGCAA AGTCGCGGTT TTAAGGATGT CCAAGTAAGC ATCGATCCAG ATCCACAGTA TTTTATGTAA
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Protein sequence | MPELAQVVVD VPTMQTNQPY TYQIPPKLEK QIQVGVRVIV PFGKGKRTVQ GFVVALDNAS QYEGELKPIQ AIMDLQPVIN PELMNLSKWL ADTTYSFWIS CLYTMLPNLL KAKTTRIIRI IDEVDEHVAF DIFHGRDELE MAAVQDKPAI LSELFKLQKE GKIAIEYQVE DRAKAKTVTG IRSLLNFEQL EDERASLHAN AHAQNRLLSY LQSIGSQVVK QKDAEHKTGL KAATFNQGQQ KGWLEKTPVE VYRQPLAMQV TPDDAHLAAP LQLNADQQNA VNQINQAIDN HDPKVFLLQG VTGSGKTEVY LQSIANALQQ GKTALMLVPE ISLTPQIVNR VRRRFGSKVA VLHSSLSNGE RYDEWRRIER GEAQVVVGAR SAVFAPLTNL GLIILDEEHE SSYKQDESPR YQAREVAKWR GKYNQAPVVL GSATPSLESR ARAVKNVYHL LRLPHRVNKQ ELPPIEVVDM RDEIKKYGES NFSQKLLTDL NDRLQKNEQS ILMLNRRGFS SFMMCRDCGN VLKCPNCDIS LTLHMDTRTM KCHYCGHEEP IPRECPNCHS HQIRYYGTGT EKVEQELHQL LPQARIIRMD VDTTRRKGMH AKLLRQFGQH QADILLGTQM IAKGLDFPNV TLVGVLNADT GLGLPDFRAS ERTFDLLSQV SGRAGRANKQ GKVIIQTYNP DHYAIQDAKT HDYEKFFNQE MMLRRQASYP PYYYTVRLMA SHPEEAKAAR AMADIYGRLK QGLLSSTVIL GPTPRAIARM KRRYYYQIVI KYKKDPYLHQ LLFDILQDTQ SRGFKDVQVS IDPDPQYFM
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