Gene Lreu_1170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1170 
Symbol 
ID5188318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp1223598 
End bp1224338 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content41% 
IMG OID640591009 
Productprotein phosphatase 2C-like protein 
Protein accessionYP_001271764 
Protein GI148544394 
COG category[T] Signal transduction mechanisms 
COG ID[COG0631] Serine/threonine protein phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.325557 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCTG CTTATCAAAC AGATATCGGC CACCAACGAA AGCAAAATCA AGACCGGGTT 
GCTGTGTTTA CTAACAAGCT AGGCAATCAA TTAATGGTTA TTGCTGATGG AATTGGCGGC
AATCGTAGCG GAGATATCGC TGCAGAGCAA ACAGTTGCGA CTTTGGGGAG TCAGTTTAAA
AAACGGCCCC CGCAGACATC AATGGAGGGG ATCCGTTGGT TTGCTCGTGA AACCCAATTA
ATCAATAATA AAATCTTAGC GCAATCCAAA CGTAATCTTC GCTTGCAGGG GATGGGAACA
ACAATGGTCG CCACTATTAC ATTTAAGGAT GCGGTTGTGG TTGCTAATAT TGGTGATAGT
CGAGGATATA TCCTTCATCA AAACCTATTA ACGCAGATTA CAGTAGACCA TTCATTGGTT
AATGAATTGG TAAAAACGGG AGATATATCA GAAGATGAAG CACTAAAGCT ACCCCAGAGC
AATATAATTA CAAGGGCAAT TGGAATCTCT CCTGATGCAC AAGTTGATGT AAACCGCTTT
GAATTAAACG AGGGTGATCA ACTGTTAATG TGTTCTGATG GCTTGTTTAA GACTGTTTCT
AAGGAGCAGA TTATCAAGGT GCTTGAATTG CCGATACCGC TTGAAGAGAA ATGTGCTCAA
CTTATAAAAA TGGCAAATGA TGCCGGCGGA CCAGATAATA TTACCGTTTT AATTGGGATT
AATAGTAACC AGGAGGGATA G
 
Protein sequence
MKAAYQTDIG HQRKQNQDRV AVFTNKLGNQ LMVIADGIGG NRSGDIAAEQ TVATLGSQFK 
KRPPQTSMEG IRWFARETQL INNKILAQSK RNLRLQGMGT TMVATITFKD AVVVANIGDS
RGYILHQNLL TQITVDHSLV NELVKTGDIS EDEALKLPQS NIITRAIGIS PDAQVDVNRF
ELNEGDQLLM CSDGLFKTVS KEQIIKVLEL PIPLEEKCAQ LIKMANDAGG PDNITVLIGI
NSNQEG