Gene Lreu_1148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_1148 
Symbol 
ID5189030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp1200338 
End bp1201468 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content36% 
IMG OID640590987 
Productphage integrase family protein 
Protein accessionYP_001271742 
Protein GI148544372 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000721683 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGATGC AAGAACGCAA TGGGAAATTC CGCTTCTTTG AGCAATATAA AGATCCTCTA 
ACTAATAAGA CTAAAATCAT TAGTATTACA ATGAAAGACC ATAAAAAGAG TACTGCTAAG
CAAGCTCAAA TTATTCTAGA TAATCGCATA TCCAAAGCTT TATCAAAAGT CGGTATCGGA
AAAATAATTC ATGGAATTAC ACTCAAACAG TTACTTGGTG AATATACTAA ATATGAAAAG
CCGCGAATTA GGAGATCAAC GTATTATAGC CATCAAACAA TGGTTAATAC CTTACTAGAT
ATTTTTGGCA ACGATGCCTT AGTTGAAAAA TTTACCCCGC TTATCATTAC TGAAAAACTA
GAAAGTCTAA TGTATGGGGA TAGAGAGTTG TCCAGTGGCT ATGTATCACG ATATAAGTAC
TATCTACACA AGTTATTTGA TTATGCCGTA AAACACTCAT ATACAAAAGA TAACCCAGTT
GATAACGTTA AAATTGATTA TAAGGCCCCT GCTAATGGTC AACAAATTAA AGATAAGTTC
CTCGAAGCTG ACGAACTGAA AGCCGTGCTC AAGTATCTAT ATAACAATAC TAGAATCTAC
GGAGAACTTT GCGAATGGTT ATATCTCACC GGGCTACGTT TTGGTGAAGC AGCCGCTTTA
AGTTTTGATG ACGTTTACCA AAAGGACAAT CATTGGTTTG TAGATATAAC TGGCACATTA
GAGTATAAAC GAATTAAAAT CAAAGAACAA AAAAAGAGTG ACGCACCTAA AACCTCATCC
TCAGTCCGTA GCGTTGTACT ACCAAAGAAA GCCGTTCAAA TTTATCTTGA TCTGAAGAAA
AAATCTAATG GCAAAGGTTT TATCTTCGCA ACCGAAAACG GCACACCGAT CCAAACGGCA
TCAGTAAATA CTGTTTTAAG ATCAGCAAAG AAGAAACTTA AACTTAATAA ACCACTAAGT
ACTCATGTAT TCAGACATAC CCACATCTCG AAAATGGCCG AGTTAGGAAT TCCGCTATAT
GTAATCCAAC AAAGAGTTGG TCACTCCAGT AGTAAGATTA CCTCCCAGAT ATATCTTCAT
GTGACACAAA AAGCAATTGA AAAGGAAGCG TCAAAACTTG ATGAACTATA A
 
Protein sequence
MWMQERNGKF RFFEQYKDPL TNKTKIISIT MKDHKKSTAK QAQIILDNRI SKALSKVGIG 
KIIHGITLKQ LLGEYTKYEK PRIRRSTYYS HQTMVNTLLD IFGNDALVEK FTPLIITEKL
ESLMYGDREL SSGYVSRYKY YLHKLFDYAV KHSYTKDNPV DNVKIDYKAP ANGQQIKDKF
LEADELKAVL KYLYNNTRIY GELCEWLYLT GLRFGEAAAL SFDDVYQKDN HWFVDITGTL
EYKRIKIKEQ KKSDAPKTSS SVRSVVLPKK AVQIYLDLKK KSNGKGFIFA TENGTPIQTA
SVNTVLRSAK KKLKLNKPLS THVFRHTHIS KMAELGIPLY VIQQRVGHSS SKITSQIYLH
VTQKAIEKEA SKLDEL