Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_1148 |
Symbol | |
ID | 5189030 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 1200338 |
End bp | 1201468 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640590987 |
Product | phage integrase family protein |
Protein accession | YP_001271742 |
Protein GI | 148544372 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000000721683 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGGATGC AAGAACGCAA TGGGAAATTC CGCTTCTTTG AGCAATATAA AGATCCTCTA ACTAATAAGA CTAAAATCAT TAGTATTACA ATGAAAGACC ATAAAAAGAG TACTGCTAAG CAAGCTCAAA TTATTCTAGA TAATCGCATA TCCAAAGCTT TATCAAAAGT CGGTATCGGA AAAATAATTC ATGGAATTAC ACTCAAACAG TTACTTGGTG AATATACTAA ATATGAAAAG CCGCGAATTA GGAGATCAAC GTATTATAGC CATCAAACAA TGGTTAATAC CTTACTAGAT ATTTTTGGCA ACGATGCCTT AGTTGAAAAA TTTACCCCGC TTATCATTAC TGAAAAACTA GAAAGTCTAA TGTATGGGGA TAGAGAGTTG TCCAGTGGCT ATGTATCACG ATATAAGTAC TATCTACACA AGTTATTTGA TTATGCCGTA AAACACTCAT ATACAAAAGA TAACCCAGTT GATAACGTTA AAATTGATTA TAAGGCCCCT GCTAATGGTC AACAAATTAA AGATAAGTTC CTCGAAGCTG ACGAACTGAA AGCCGTGCTC AAGTATCTAT ATAACAATAC TAGAATCTAC GGAGAACTTT GCGAATGGTT ATATCTCACC GGGCTACGTT TTGGTGAAGC AGCCGCTTTA AGTTTTGATG ACGTTTACCA AAAGGACAAT CATTGGTTTG TAGATATAAC TGGCACATTA GAGTATAAAC GAATTAAAAT CAAAGAACAA AAAAAGAGTG ACGCACCTAA AACCTCATCC TCAGTCCGTA GCGTTGTACT ACCAAAGAAA GCCGTTCAAA TTTATCTTGA TCTGAAGAAA AAATCTAATG GCAAAGGTTT TATCTTCGCA ACCGAAAACG GCACACCGAT CCAAACGGCA TCAGTAAATA CTGTTTTAAG ATCAGCAAAG AAGAAACTTA AACTTAATAA ACCACTAAGT ACTCATGTAT TCAGACATAC CCACATCTCG AAAATGGCCG AGTTAGGAAT TCCGCTATAT GTAATCCAAC AAAGAGTTGG TCACTCCAGT AGTAAGATTA CCTCCCAGAT ATATCTTCAT GTGACACAAA AAGCAATTGA AAAGGAAGCG TCAAAACTTG ATGAACTATA A
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Protein sequence | MWMQERNGKF RFFEQYKDPL TNKTKIISIT MKDHKKSTAK QAQIILDNRI SKALSKVGIG KIIHGITLKQ LLGEYTKYEK PRIRRSTYYS HQTMVNTLLD IFGNDALVEK FTPLIITEKL ESLMYGDREL SSGYVSRYKY YLHKLFDYAV KHSYTKDNPV DNVKIDYKAP ANGQQIKDKF LEADELKAVL KYLYNNTRIY GELCEWLYLT GLRFGEAAAL SFDDVYQKDN HWFVDITGTL EYKRIKIKEQ KKSDAPKTSS SVRSVVLPKK AVQIYLDLKK KSNGKGFIFA TENGTPIQTA SVNTVLRSAK KKLKLNKPLS THVFRHTHIS KMAELGIPLY VIQQRVGHSS SKITSQIYLH VTQKAIEKEA SKLDEL
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