| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_1062 |
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| Symbol | |
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| ID | 5189155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | + |
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| Start bp | 1125301 |
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| End bp | 1125876 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640590901 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001271656 |
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| Protein GI | 148544286 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000000136578 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATTACC AAAAAATTTC TGACGGTCTA ACTTTTCTGA TGAGCGATAA GCGGATCACG
ATTGTCCATG GAGTATTAAA GAGTCTCGGG ATCTCACCGC GCCGGGACGA CTATGATGAT
TTTGTCCAAG ATGCTTCGAT TATCTTTGCC CAGGCCTACG CTGATTTCTT ACAGGAGACA
GATGAGGTCG AAAACGAACG GGACTTGATG TGTTTTGCTT ACCAACGGAT GCGCTGGCGT
TTACTGGACC GGTTACGGCG GCAGCAACTT GAAAGTTTCC TCTTTAATTA CACCCTCGAC
AATGAGGAAG ATGATCATGA CTACGACGAG ACAATGGTTG ACCATACAGC GACCGCCCCA
TTTGCTCACC TAGAAAATAG CGACTTTCTT AATTACCTCT ACCACCATTG TCCCCGCGTT
CAACAACGGT ATTTGATTGC CAAACTCAAC CACCATTTGA GTGACCGGCA GATTGCGGAT
GAGTACCAGG TCAGCCGGGC AGCCGTTTCG CAATGGCGGC GAGGAGTGAT TACCCGTGCC
CACCAGATTC GTGCTAAAAT GAAAGGAGAG TTTTGA
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| Protein sequence | MNYQKISDGL TFLMSDKRIT IVHGVLKSLG ISPRRDDYDD FVQDASIIFA QAYADFLQET
DEVENERDLM CFAYQRMRWR LLDRLRRQQL ESFLFNYTLD NEEDDHDYDE TMVDHTATAP
FAHLENSDFL NYLYHHCPRV QQRYLIAKLN HHLSDRQIAD EYQVSRAAVS QWRRGVITRA
HQIRAKMKGE F
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