| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0988 |
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| Symbol | |
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| ID | 5188681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | - |
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| Start bp | 1042936 |
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| End bp | 1043670 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640590827 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001271586 |
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| Protein GI | 148544216 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAACTGA CAGATAAAGT CGTTTTTATA AGCGGAAGCA CACGCGGAAT TGGGGCAGCT
ACTGCATTAG AGTTCGCTAA GGCTGGTAGT CGGTTAATTC TCAATGGGCG TCAAGATGAC
TTACCAAAAG CGTTTAAAGA AAAGCTAGAT CTACTAGGAA CGGAATATCA CTATCTTAAG
GGCGATATTG CAAACGAAGA ATCAGTTAGT GAATTAGCAG CAGCGGCGTG GCAAATATAC
GAGAAGATCG ACATTCTTAT CAATAACGCG GGAATTACGA ATGATAAGTT AATGATGGGG
ATGAAAACGA GCGATTTTGA TCAGATCATC AATGTTAATT TACGCGGAAC ATTTATGTTA
ACGCAACCTA TTTTTAAGAA GATGCTCAAA AAAAGAGCCG GTTGCATTAT TAACCTTGCT
AGTATTGTGG GTCTCCATGG TAATACGGGA CAAGCTAATT ATGCGGCAAG CAAGGCAGGT
ATAATCGGCC TTACTAAATC TATTGCCCAA GAAGGAGCAC ACCGCGGAAT TAGGTGCAAT
GCAATTGCTC CCGGAATGAT TACTAGTGAT ATGACTGAAA AATTATCTGA GCGAGTAAAA
GAACAAATTC TCAGTCGCAT CCCCCTTAAC CGCTTAGGAC AGCCAAAAGA AGTTGCTAAG
ACCGCAAAAT TTTTAGCAGA AAATGATTAT TTGACCGGTC AAACCATTGT AGTTGACGGT
GGCATGACAA TTTAG
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| Protein sequence | MELTDKVVFI SGSTRGIGAA TALEFAKAGS RLILNGRQDD LPKAFKEKLD LLGTEYHYLK
GDIANEESVS ELAAAAWQIY EKIDILINNA GITNDKLMMG MKTSDFDQII NVNLRGTFML
TQPIFKKMLK KRAGCIINLA SIVGLHGNTG QANYAASKAG IIGLTKSIAQ EGAHRGIRCN
AIAPGMITSD MTEKLSERVK EQILSRIPLN RLGQPKEVAK TAKFLAENDY LTGQTIVVDG
GMTI
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