| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0916 |
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| Symbol | |
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| ID | 5188474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | + |
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| Start bp | 972273 |
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| End bp | 975137 |
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| Gene Length | 2865 bp |
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| Protein Length | 954 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640590747 |
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| Product | DnaQ family exonuclease/DinG family helicase |
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| Protein accession | YP_001271515 |
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| Protein GI | 148544145 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases
[COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family
[TIGR01407] DnaQ family exonuclease/DinG family helicase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACACAGC GTAGTAGTCA GCGCACAAAA AAGCGTGACA AGAAAGCGCC AATCTACTCA
GTTGTTGATT TAGAAACGAC CGGAACGAAT GTTAATCATG GTGATCGAAT CATTCAAATC
GGTTGTGTTC TCGTTCAAGA TGGCGAAATC ATAAATCACT TTGAAACAAA AATAAATCCA
CGAGAGAAAA TTCCTCGTTC AATTGTTCAA TTAACAGGAA TTGAAGATAA AGACGTACGA
AAAGCACCTT TATTTGAGGA TATTGCTGGA ACTATTTATA GCTTGCTGGC GGAAACGACC
TTTGTGGCTC ACAATGTTAA TTTTGACTTT CCTTTTCTAA ATGCAGAATT AGAGCGAGCT
GGATATCCTT CATTGTCAAT TCCAGCAATC GATACTGTGA CCCTTAGTCA GATTCTTCTT
CCTACTGCAA AGAGTTTCCG TTTACGAGAC TTAACTAGTT CGTTGCACAT TGAGCATGAT
CACCCTCATA GTGCAGTATC AGACGCTGAG GCAACAGCAG ACTTACTTAA TGACTTGCTA
AAACGAGTTC AAGAATTACC AACGCTTACG CTTGAAAAGA TTACTCAGTT GAAGCTCAAC
TTACCTCAAC AAACAGCTGG GGTTTTTGAT GCTGAGTTAC AGCGTCGACG TAAATCGCCC
CAGCCATTAA GTGAAGAGCT GTATGTCTCG CACGGAATTG TTCTTCATAA ATCGCGGCCA
ATCACTGCTA ATAGTCAGCG GGAAAAGCAT AAATATCCTT CAACTAAAAA GGCAAAGGAA
AAGCTATACG GAGATACGTT GAGACTGCGG CCTGTTCAAG CAAAAATGAT GAACAGCATT
TACAATAATT ATACTCATGA TGAACCCAAA AATATGATTG TTGAGGCTGG AACTGGAGTA
GGGAAGACAT TGGGCTACCT TTTTCCGCTA AGTTATGTTG CATATCCCGA TAAGAAGATT
GTCGTCAGCA CAGCAACCAA TATCCTCCAG CAACAAATTA TTGATACATC AATCGCGCAA
CTAAACAAGG TGTTGCCTTT TAAAATGAAT AGTGTGATTA TCAAGGGAAA CGCTCATTAT
ATTGATATTG CACGTTTTGT TCATTCCTTA AGCGTAATTG AAGATTCGAA GCTCGTTCAG
TTATTAAAAG CTAAAATTTT AGTATGGCTG CTTTCGACGC AAAGTGGGGA CCTTGATGAA
CTTAATTTAA ATTCTCAGCA GTCGCCATAC TTTACTGAAA TTCGTCATCA GGGTATTCGG
AGCTTGAATC CAGTAAATGC CTTTTACCAT GATGATTTTC TCGTTCGGCG GGAAAAACGG
CTTCATCAAG CTGATATTAT TATTACGAAT CATGCGTATT TGGTTGCTCA TGCCCAGGAA
TTAGGGGATG GAACTCGTCG CCCATACTTA GTAATCGATG AAGCTCAGCA CTTAAGCGAA
AGTATCTTAA AACGGTCCCG GCGAACATTT AATTTTCAAA AATTACGTAC GGCCGTTCAT
GTAATGTCTG GGTTAGTTAA TAATGGTAAT GACCGAAATT TAACCGATAT TTTCGCTGAA
CAGGCACTAG GCAGTTATAA TGTTGAATTG CTTCGTGGCG ATCTCAATGC AGTAGAAGAA
GCAGTTGACC TTTTCCAACA AGCCCTTTAC CGTCAATACA TGGCAAGTGC CACTAGTAAT
CCCGACAATG AATTAATTGA ACAACCATTG CGAAATGATC AGGTGATGTC TCTCTTAGAT
ATTAGTGGAC CCGTGATGAT GAAGCTAGAG CAAGCATTAA GCAGTGTGCA GCTTCATTTT
TCTGCCCTCA GTCATCTGTT TAGCAGTCAG CCAGACCGGT GGTTGTTAAG TGATCGTTAC
CTTATGAGCC AATTTCAGAG TCAGCTTGCA AAATTAATTG AGGCCGATCA GACATTAAAT
GAATTTAACG AAACGCTTCA ACAACAAGGA GAGGCTGCTG CTTTTTGGAT TACTATTCGC
CAATCAAGTG AACAAAGTGC CTTACAGCTT AGTGGGGGGC TATTGGAAGC AACCCATTAC
CTCACAAAGA ATGTTTATCC ATATTTTGCT CAACCATTAT TTGTGGGAGC GACATTGTTT
ACATCGCCAC GATCGCCGTA TCTTTACCAC CAATTAGATT TAGAGCGCAA TAATACTTTA
ACGCGTCGAT TCGCATCTCC ATACAATTAC AAACAGAATG CTAAATTATT GATTGCAGAA
GATGCCCCAG TACCGAGCGC GCAAAATAAC AGTGATTACA TTAAATACCT CAGTGACACG
ATTTACCAAT TAACGAAGAA TGCTGATTAT CAGACAATGA TTTTATTCAA CTCATTGGTG
ATGATTGAGC AGATATATAG CCAACTTCGT GAAACGGATC TATTTGATCA GCGAGATATT
TTAGCCCAAG GAATTACGGG TAATCGTGAT AAAATCTTAA AACAGTTTAG TGGTGGAAAA
AATTCGATCC TTCTTGGTGC TTCTAGTTTT TGGGAAGGGA TAGATTTACC AGAGTCCGCT
CTTGAACTCT TAATTATTAC GCGCTTACCG TTCGATTCGC CTGATGAAAT AATGAATCGT
GCTCATAATA AGTTACTTCA GCAGCAGGGG AAAAATCCGT TCTATCATTC AGAATTGCCA
AAAGCAACGA TGCGGTTACG TCAGGGGATT GGACGATTAT TACGGACAGA AGATGATCAT
GGGGTGGCAG TAGTTCTTGA TCCACGACTA CAGACAAGAC GGTATGGGAA GACGATTTTG
AGTAGTCTGC CCACTGATTT ACCGGTTAAT AGCAAAAAAA CTGCTGACTT GATTTCAATT
ACTCAGAAGT TTTTACGAAA TGGTAAAGAG GACAAAGTTA ATTAA
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| Protein sequence | MTQRSSQRTK KRDKKAPIYS VVDLETTGTN VNHGDRIIQI GCVLVQDGEI INHFETKINP
REKIPRSIVQ LTGIEDKDVR KAPLFEDIAG TIYSLLAETT FVAHNVNFDF PFLNAELERA
GYPSLSIPAI DTVTLSQILL PTAKSFRLRD LTSSLHIEHD HPHSAVSDAE ATADLLNDLL
KRVQELPTLT LEKITQLKLN LPQQTAGVFD AELQRRRKSP QPLSEELYVS HGIVLHKSRP
ITANSQREKH KYPSTKKAKE KLYGDTLRLR PVQAKMMNSI YNNYTHDEPK NMIVEAGTGV
GKTLGYLFPL SYVAYPDKKI VVSTATNILQ QQIIDTSIAQ LNKVLPFKMN SVIIKGNAHY
IDIARFVHSL SVIEDSKLVQ LLKAKILVWL LSTQSGDLDE LNLNSQQSPY FTEIRHQGIR
SLNPVNAFYH DDFLVRREKR LHQADIIITN HAYLVAHAQE LGDGTRRPYL VIDEAQHLSE
SILKRSRRTF NFQKLRTAVH VMSGLVNNGN DRNLTDIFAE QALGSYNVEL LRGDLNAVEE
AVDLFQQALY RQYMASATSN PDNELIEQPL RNDQVMSLLD ISGPVMMKLE QALSSVQLHF
SALSHLFSSQ PDRWLLSDRY LMSQFQSQLA KLIEADQTLN EFNETLQQQG EAAAFWITIR
QSSEQSALQL SGGLLEATHY LTKNVYPYFA QPLFVGATLF TSPRSPYLYH QLDLERNNTL
TRRFASPYNY KQNAKLLIAE DAPVPSAQNN SDYIKYLSDT IYQLTKNADY QTMILFNSLV
MIEQIYSQLR ETDLFDQRDI LAQGITGNRD KILKQFSGGK NSILLGASSF WEGIDLPESA
LELLIITRLP FDSPDEIMNR AHNKLLQQQG KNPFYHSELP KATMRLRQGI GRLLRTEDDH
GVAVVLDPRL QTRRYGKTIL SSLPTDLPVN SKKTADLISI TQKFLRNGKE DKVN
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