Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0893 |
Symbol | |
ID | 5190081 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 948864 |
End bp | 950102 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640590725 |
Product | SufS subfamily cysteine desulfurase |
Protein accession | YP_001271493 |
Protein GI | 148544123 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0520] Selenocysteine lyase |
TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.918138 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACAACA ATACAAATGA TTATTTAGCC GACTTTCCAG CACTTAATCA GCGGGTCAAT GATGAACGCT TAGCCTACCT TGATAATGCT GCGACAGTTC AGCGTCCGCG TCAGGTAATT CAGGCACTTG TTAACTTTTA TGAACAAGAC AATGCAAATG TTCATCGAGG GGTTCATACA CTAGCAGAAC GTGCAACCAA GGATTATGAA GAAGCACGAA AAAAAGTGCA AAAGTTTATT AATGCGCCGA GTGCTAAGGA GATTATCTTT ACCAAGGGGT GTACGGATGG GTTGAATCTC GTCGCTGCAA CCTATGGCGA ACAAAATATT CAACCTGGTG ATGAGATTGT TATTTCAATA ATGGAACACC ATAGTAACCT TATTCCTTGG CAACAATTAG CTAAGAAAAA GGGTGCTACC CTGAAATATA TTGAATTAAC TCCAGATGGC GAACTTGATC TTGCAGATGC TAGAAAGAAA ATTACCGATA AGACAAAGAT TGTGGCAGTA GCCCATGCTA GTAATGTATT AGGAACAGTG ACGCCCTTGA AAGAATTAGC AACGATTGCG CACCAGCATG GGGCAATTAT TGTCGGTGAT GGCGCGCAAG CAGTTCCCCA TATGCCTGTC GATGTACAAG ATCTTGATGT TGACTTTTAC GCTTTCTCTG GTCATAAGAT GATGAGTCCA ATGGGAATAG GGGTTTTGTA CGGAAAAGAG AATTTATTAC GAGCGATGCC TCCTTACCAA TACGGTGGGG AAATGATTAA TGATGTTCAC CGAGATGAGA GTACATGGGC TGATATTCCG TTTAAATTTG AAGCGGGAAC CCAAAATATT GCCGGGGCAG TAGGTCTTGG AGCCTCAATT GATTATTTAA ATAGCATTGG AATGGATAGG ATTGTGCAAA AGGAACAGGA ACTTGTTAAC TATGTTTTGC CTAAGTTAAT TGCTATTCCA GACGTTGAAG TTTATGGTCC GCAATCACCG GCAAAGCATA CTGGGGTAAT TGCCTTTAAC ATCAAAGGCC TTCATCCCCA TGATGTTGCT ACGGCCCTTG ATATGGATGG GGTAGCAGTC CGCGCCGGTC ACCATTGTGC GCAGCCACTC ATGGAAGACC TGGGAGTAAC GGCAACCGCG CGTGCCAGTT TTTATTTTTA CAATACTAAA GAAAATGCTG ATCAATTAAT TAATGCAATC AAAGAAACAA AGGAGTTCTT TAACATTGGG ACTATCTAA
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Protein sequence | MDNNTNDYLA DFPALNQRVN DERLAYLDNA ATVQRPRQVI QALVNFYEQD NANVHRGVHT LAERATKDYE EARKKVQKFI NAPSAKEIIF TKGCTDGLNL VAATYGEQNI QPGDEIVISI MEHHSNLIPW QQLAKKKGAT LKYIELTPDG ELDLADARKK ITDKTKIVAV AHASNVLGTV TPLKELATIA HQHGAIIVGD GAQAVPHMPV DVQDLDVDFY AFSGHKMMSP MGIGVLYGKE NLLRAMPPYQ YGGEMINDVH RDESTWADIP FKFEAGTQNI AGAVGLGASI DYLNSIGMDR IVQKEQELVN YVLPKLIAIP DVEVYGPQSP AKHTGVIAFN IKGLHPHDVA TALDMDGVAV RAGHHCAQPL MEDLGVTATA RASFYFYNTK ENADQLINAI KETKEFFNIG TI
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