Gene Lreu_0893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0893 
Symbol 
ID5190081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp948864 
End bp950102 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content42% 
IMG OID640590725 
ProductSufS subfamily cysteine desulfurase 
Protein accessionYP_001271493 
Protein GI148544123 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0520] Selenocysteine lyase 
TIGRFAM ID[TIGR01979] cysteine desulfurases, SufS subfamily 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.918138 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAACA ATACAAATGA TTATTTAGCC GACTTTCCAG CACTTAATCA GCGGGTCAAT 
GATGAACGCT TAGCCTACCT TGATAATGCT GCGACAGTTC AGCGTCCGCG TCAGGTAATT
CAGGCACTTG TTAACTTTTA TGAACAAGAC AATGCAAATG TTCATCGAGG GGTTCATACA
CTAGCAGAAC GTGCAACCAA GGATTATGAA GAAGCACGAA AAAAAGTGCA AAAGTTTATT
AATGCGCCGA GTGCTAAGGA GATTATCTTT ACCAAGGGGT GTACGGATGG GTTGAATCTC
GTCGCTGCAA CCTATGGCGA ACAAAATATT CAACCTGGTG ATGAGATTGT TATTTCAATA
ATGGAACACC ATAGTAACCT TATTCCTTGG CAACAATTAG CTAAGAAAAA GGGTGCTACC
CTGAAATATA TTGAATTAAC TCCAGATGGC GAACTTGATC TTGCAGATGC TAGAAAGAAA
ATTACCGATA AGACAAAGAT TGTGGCAGTA GCCCATGCTA GTAATGTATT AGGAACAGTG
ACGCCCTTGA AAGAATTAGC AACGATTGCG CACCAGCATG GGGCAATTAT TGTCGGTGAT
GGCGCGCAAG CAGTTCCCCA TATGCCTGTC GATGTACAAG ATCTTGATGT TGACTTTTAC
GCTTTCTCTG GTCATAAGAT GATGAGTCCA ATGGGAATAG GGGTTTTGTA CGGAAAAGAG
AATTTATTAC GAGCGATGCC TCCTTACCAA TACGGTGGGG AAATGATTAA TGATGTTCAC
CGAGATGAGA GTACATGGGC TGATATTCCG TTTAAATTTG AAGCGGGAAC CCAAAATATT
GCCGGGGCAG TAGGTCTTGG AGCCTCAATT GATTATTTAA ATAGCATTGG AATGGATAGG
ATTGTGCAAA AGGAACAGGA ACTTGTTAAC TATGTTTTGC CTAAGTTAAT TGCTATTCCA
GACGTTGAAG TTTATGGTCC GCAATCACCG GCAAAGCATA CTGGGGTAAT TGCCTTTAAC
ATCAAAGGCC TTCATCCCCA TGATGTTGCT ACGGCCCTTG ATATGGATGG GGTAGCAGTC
CGCGCCGGTC ACCATTGTGC GCAGCCACTC ATGGAAGACC TGGGAGTAAC GGCAACCGCG
CGTGCCAGTT TTTATTTTTA CAATACTAAA GAAAATGCTG ATCAATTAAT TAATGCAATC
AAAGAAACAA AGGAGTTCTT TAACATTGGG ACTATCTAA
 
Protein sequence
MDNNTNDYLA DFPALNQRVN DERLAYLDNA ATVQRPRQVI QALVNFYEQD NANVHRGVHT 
LAERATKDYE EARKKVQKFI NAPSAKEIIF TKGCTDGLNL VAATYGEQNI QPGDEIVISI
MEHHSNLIPW QQLAKKKGAT LKYIELTPDG ELDLADARKK ITDKTKIVAV AHASNVLGTV
TPLKELATIA HQHGAIIVGD GAQAVPHMPV DVQDLDVDFY AFSGHKMMSP MGIGVLYGKE
NLLRAMPPYQ YGGEMINDVH RDESTWADIP FKFEAGTQNI AGAVGLGASI DYLNSIGMDR
IVQKEQELVN YVLPKLIAIP DVEVYGPQSP AKHTGVIAFN IKGLHPHDVA TALDMDGVAV
RAGHHCAQPL MEDLGVTATA RASFYFYNTK ENADQLINAI KETKEFFNIG TI