| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0869 |
|---|
| Symbol | |
|---|
| ID | 5189901 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | + |
|---|
| Start bp | 919441 |
|---|
| End bp | 920973 |
|---|
| Gene Length | 1533 bp |
|---|
| Protein Length | 510 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 640590701 |
|---|
| Product | N-6 DNA methylase |
|---|
| Protein accession | YP_001271469 |
|---|
| Protein GI | 148544099 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0286] Type I restriction-modification system methyltransferase subunit |
|---|
| TIGRFAM ID | [TIGR00497] type I restriction system adenine methylase (hsdM) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGCAACAA AGTCTAAAGA GCTAAATATT GAAGATAAAT TATGGAAGGC TGCTGATGCA
TTGCGTGGAA GTATGGATGC ATCAGAATAT CGTAATGTTG TATTAGGATT GATCTTTCTT
AAATATGCGT CAGATTCCTT TGAAGAAAGA AGACAAGAAC TTTTAAAAAC AGAATATCCT
GAAGATGCAG AAGATCCGGA TATGTATCTA GAAAATAATA TTTTCTGGGT TCCTCAAGAG
GCTCGTTGGG CAAAGATTGA ACATGCTGCT AAAACACCTC AAATTGGTGA AGTGATTGAT
GATGCAATGA CTGCAATTGA AAAGAGCAAT GATTCATTTC GAGGGATTTT GAGTAAAAAC
TATGCTTCAC CAGATCTTGA TAAAACACGC TTGGGTGAAG TAGTTGATTT AATTTCGGAC
ATTAAGGTTG GAACTAAAGA ATCTACAGAT AAAGATGTTT TAGGTCGTGT TTACGAATAT
TTCTTAAATG AATTTGCTAG TCAAGAGGGT AAACACGGTG GTGAGTTCTA TACACCACGG
TCAATTGTTA AAATCTTAGT TGAAATGATT GAGCCTTATA AAGGACGTAT TTATGATCCT
TGTTGTGGTT CAGGTGGAAT GTTTGTCCAA TCAGAAGAGT TCGTTCGTCA TCATCAGGGA
GAGTTGAAAG ATCTTCACGT ATTTGGTGAG GAATCTAACC CAACTACTTG GAAATTAGCT
AAGATGAATT TAGCGATTAG AGGAATTGAT AGCGACTTAG GCCCCCACCA AGGCGACACT
TTCACTAATG ATTTACATAA AGGTGTTCGT TTCAACTACA TTTTGGCTAA TCCACCATTC
AACATTAAAA ACTGGGGTGG CGAAAAGCTT CAAGAAGATG CTAGATGGAA ATATGGTGTT
CCACCAACAG GAAATGCAAA TTATGCCTGG ATTGAACATA TTATTAGTAA GTTAGCACCG
GATGGGAAAG CTGGCTTTGT TTTAGCTAAC GGTGCCTTAT CGACTTCTAA TAAAGAAGAG
TTTGCTATTC GTAAAGCAAT TTTAGAAGAT GATAAGATTG ATGCAATTGT TGCTTTACCT
GAAAAAATGT TTTATTCAAC GGGGATTCCA GTTTCATTAT GGTTTGTTGA TATGAATAAG
GAATCTGAGG ATGAACGCTC GCGAAAGGGT GAGACATTAT TTATTGATGC ACGTAATTTG
GGTGAGATGA TTGATCGAAC TCATCGTGCA TTTAATGATG ATGATATTAA AAAAGTAGCG
GATACTTACC ATGCTTATCG TGGTACAAAC GATCAAGAAT ATAAAGATGT TGCTGGCTTT
TGTAAAATTG CTAAGTTAGA TGAGATCGCT AAAAATGATT ATGTATTAAC GCCTGGTCGC
TATGTTGGCC TTGCTAAACA AGAAGATGAT GGAGAATCAT ACGAAGTTAA AATGAAGAGA
CTAACTAGTG AATTAAAAGA ACAATTTGAG GAGAGTAATA AGTTACAAGC TCAAATTAAA
GATGTATTGA AGGAGCTTGG ATATGAAATA TAA
|
|---|
| Protein sequence | MATKSKELNI EDKLWKAADA LRGSMDASEY RNVVLGLIFL KYASDSFEER RQELLKTEYP
EDAEDPDMYL ENNIFWVPQE ARWAKIEHAA KTPQIGEVID DAMTAIEKSN DSFRGILSKN
YASPDLDKTR LGEVVDLISD IKVGTKESTD KDVLGRVYEY FLNEFASQEG KHGGEFYTPR
SIVKILVEMI EPYKGRIYDP CCGSGGMFVQ SEEFVRHHQG ELKDLHVFGE ESNPTTWKLA
KMNLAIRGID SDLGPHQGDT FTNDLHKGVR FNYILANPPF NIKNWGGEKL QEDARWKYGV
PPTGNANYAW IEHIISKLAP DGKAGFVLAN GALSTSNKEE FAIRKAILED DKIDAIVALP
EKMFYSTGIP VSLWFVDMNK ESEDERSRKG ETLFIDARNL GEMIDRTHRA FNDDDIKKVA
DTYHAYRGTN DQEYKDVAGF CKIAKLDEIA KNDYVLTPGR YVGLAKQEDD GESYEVKMKR
LTSELKEQFE ESNKLQAQIK DVLKELGYEI
|
|---|
| |