Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0777 |
Symbol | rnhB |
ID | 5189651 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 849050 |
End bp | 849820 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640590610 |
Product | ribonuclease HII |
Protein accession | YP_001271378 |
Protein GI | 148544008 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0164] Ribonuclease HII |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0119605 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATAAGG AAACCATTAG TCAAATTAAG GCCCGTTTAC AAACTATCAC AGATACAACT GATCCTTACT TGCAAACTAT TCATGATGAT TCGCGAAAAG GTGTTCAAAC GGCAATTCAG CAATTTGAGC GGCGGCTTGC ACGGCAGAAG GAAGCTGAAG AGGCGTTCAA TAACCGGTTC AAATACGAAA AGTACTATTG GGAAAATGGA TGTCAGTATA TTGCAGGGAT GGATGAAGTA GGAAGAGGAC CATTGGCTGG GCCAGTGGTT ACTTGTGCAG TAATTTTAAA TGCAGATTTT GACCTGATAG GGGTAACTGA TTCTAAACAA TTAACTAGGC ATGAACGGGA AAATTTATAT TTACGGATTG TTGATGAGGC GGTTGAAGTT AGCATCGCGG TGAATGATGC GCCAGTGATT GATCAAATGA ATATTTATGC TGCTACCCAG GATGCAATGA TTCGGGCAGT TAATCACCTT CACCATCGGC CAGATCATCT GATTGTTGAT GCTGTCCCGT TAGCAATTGA TATTCCCCAG ACGACTTTGA TCAAGGGGGA TCAAAAGAGT ATTAGCGTTG CTGCAGCCAG TATTGTCGCA AAAGAATACC GTGATCACCT AATGCGAGAC TATGATTATG TTTATCCAGG GTATGGTTTT GCACAAAATA TGGGTTATGG AACTAAAGAA CATTTAGCCG GCTTAGAAAA AATGGGGGCA ACTCCTATTC ATCGGCGTTC TTTTAATCCC GTTCCAAAAT ATTTAAATTA A
|
Protein sequence | MNKETISQIK ARLQTITDTT DPYLQTIHDD SRKGVQTAIQ QFERRLARQK EAEEAFNNRF KYEKYYWENG CQYIAGMDEV GRGPLAGPVV TCAVILNADF DLIGVTDSKQ LTRHERENLY LRIVDEAVEV SIAVNDAPVI DQMNIYAATQ DAMIRAVNHL HHRPDHLIVD AVPLAIDIPQ TTLIKGDQKS ISVAAASIVA KEYRDHLMRD YDYVYPGYGF AQNMGYGTKE HLAGLEKMGA TPIHRRSFNP VPKYLN
|
| |