| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0730 |
|---|
| Symbol | |
|---|
| ID | 5189358 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | + |
|---|
| Start bp | 799117 |
|---|
| End bp | 800094 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640590563 |
|---|
| Product | choloylglycine hydrolase |
|---|
| Protein accession | YP_001271331 |
|---|
| Protein GI | 148543961 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3049] Penicillin V acylase and related amidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000000000286672 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGCACAT CAGTAATTTA TACAGCAGGT GATTATTACT TTGGTCGTAA TCTTGATTTG
GAAGTCAACC TTGGTCAAGA AGTAGTGATT ACCCCGCGTA ATAAGACTTT AGAATTCCGG
GAAATGCCCA ATCTTGAACA CCATTATGCA ATTATTGGAA TGTCAATTGT TCGTGATGAT
TATCCATTAT ACTTTGATGG GGTAAATGAA AAAGGGGTTG GGATGGCAGG CCTTAATTTT
GATGGTCCAG CTCATTATTT CCCAGTCCAA GAGGGGAAGG ATAATATTGC ATCCTTTGAA
TTAGTTCCTT ATATTCTTGC GGCAGCTTCC TCGGTTGCTG AAGCGAAGAA GTTACTTTCA
AATGCAAACA TTGCTAATAT TAATTTTTCT GATAAACTCC AAGCTGCACC GCTACACTGG
ATTATTGCTG ATAAAACGGG TGCTTCTGTG ACTGTTGAAT CCACCGCAAA AGGATTGAAT
GTTTATGATA ACCCAGTTGG TGTTTTGACA AATAATCCGG AGTTTCCTCG TCAATTATTA
AATCTTAGTA ACTATCGTAG TGTTGCACCT GCTAATCCGG CTAACGTATT TGCACCTAAT
GTCGACCTAC CAGTTTATAG CCGGGGCTTA GGGACCCATT TTCTCCCGGG AGGAATGGAT
TCTGAAAGTC GTTTTGTTAA GGCTACTTTC ACTAAGATGC ATGCCCCAGT TGGTAATTCT
GAGGTTGAGA ATATTACCAA CTATTTCCAC ATTCTTCAAT CTGTCGAACA ACAAAAGGGT
TTGGATGAAG TAGCACCGAA TACTTTTGAA TATACGATTT ATTCTGATGG TTCGAACCTA
AAGAAAGGGA TTTTTTACTA CAAGACTTAC GAAAACAGTC AAATTAATGC AGTTGATATG
CATAAGGAAG ATCTTGAAGC ATCAGAATTA ATTACCTATC CAGTTCAAAA TAAACAAATA
ATTAACCAAC AAAATTAA
|
|---|
| Protein sequence | MCTSVIYTAG DYYFGRNLDL EVNLGQEVVI TPRNKTLEFR EMPNLEHHYA IIGMSIVRDD
YPLYFDGVNE KGVGMAGLNF DGPAHYFPVQ EGKDNIASFE LVPYILAAAS SVAEAKKLLS
NANIANINFS DKLQAAPLHW IIADKTGASV TVESTAKGLN VYDNPVGVLT NNPEFPRQLL
NLSNYRSVAP ANPANVFAPN VDLPVYSRGL GTHFLPGGMD SESRFVKATF TKMHAPVGNS
EVENITNYFH ILQSVEQQKG LDEVAPNTFE YTIYSDGSNL KKGIFYYKTY ENSQINAVDM
HKEDLEASEL ITYPVQNKQI INQQN
|
|---|
| |