| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0727 |
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| Symbol | |
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| ID | 5189219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | - |
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| Start bp | 796489 |
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| End bp | 798000 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640590560 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001271328 |
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| Protein GI | 148543958 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component
[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000000479447 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGGTT TTAAACATTT ATTACTGCTA ATGGTAATTG CGTTTCCGAT ATTATGTACA
CCTATTACTG CATTAGCTGC TAACGAGAGC AGTTCAACTA GCTCTTCGTC AGCCAATAAT
CCATCGCAAG TCGCTAGTAA TGATTCAGTA CAAAAGATTA AACAAAAAGG AACACTGGTT
GTGGGAATGA GTGCTGATTA TCCACCCTAC GAATTCACAA CCAAAGAAAA TGGAAAAACT
AAATATGTCG GTTTTGAAGT TTCCCTTGCT AAACAATTTG CTAAAGACTT GGGAGTAAAA
CTAGTTATTA AAAACATGGA CTTTGACTCA CTTCTAGTTG CACTGGAAAC GGGTAAAATT
GATGCTATTA TTTCGGGAAT GAACGTTACA GCTGAACGAA AAAAGAGCGT TGACTTCTCA
AATACATATT ATTCCGGCGA TAGTTACTTC TTAATTAATA AAGGAGATAA AGATAAGCTA
GTTAATGTCA AAAGTTTTAA TGGGAAAAAT GTAGGAGCAC AAAACGGTAC GCTCCAATCA
ACCCTGATTT CAAAGGAAAT GCCTAAAGCA AACGGCAAAG GGCTTGCTAA ACTTTCTTCC
TTAGTCATTG GGCTTCAATC TCATAAATAT GATGGGATTT TAATGGATGC TGCTACTGCT
AAAGCCTATG CTGCCAATAA TTCAAATCTT TATGCCTTTA ATTCGAAATT GCCAAATACT
GCTGGCGGAA TTGCCATGGC CTTTCCTAAA GGTGATACTT CGTTAGTCAA TGCTGCCAAC
CAAACAATTA AAAAAGTTAA CAAAGAACAA CTAATTAATA AAAAATGGAT TCCTGAAGCC
TCCCAATACA TGAAGAGTTA TAAAAAGCAA AATACTGTTC TTAGCTATTG GCGTTACTTT
GCTAAAGGGA TTAAATATAC ATTAATCATT ACAGTTGTCT CTGTTATTTT TGGTTTCCTA
TTAGGGACTC TCTTTGCACT AATGCGGCTT TCAAAGAACA AATTTTTACA TTCAATTGCG
GTTTGCTACA TTGAATTTCT CCGGGGTACG CCAATGATGG TTCAAATCAT GTTTGTTTAC
TTTGGGATTG GGGCACTTAT TCAATCACTT CCGGCCCTCC TCGCTGGGAT TATTGCCGTT
TCACTAAACT CTGGTGCTTA TGTTGCTGAA ATTATTCGTT CTGGAATCCA ATCCATTCCG
CTTGGACAAA CAGAAGCTGC TCGGAGCTTG GGGATGAGTA AAAACGAAAC ATTCAGATAT
GTGATTATGC CACAAGCACT TAAAAATATT TGGCCAGCAT TAGGAAATGA GCTTATTACT
TTATTAAAAG ATAGTTCATT AGTTTCTGTG ATTGGTGTTT CCGAATTGAT GTATCAAACA
CAATTAGTGC AATCAGCAAC TTATAAAGGA GTTTTACCTC TATTCATCAC AATGATCATC
TACTTTATCC TCACATTTAC GCTATCCAGG ATTTTGTTTT ACTTTGAAGG GAGAATGAAA
CATGCCCACT AA
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| Protein sequence | MKGFKHLLLL MVIAFPILCT PITALAANES SSTSSSSANN PSQVASNDSV QKIKQKGTLV
VGMSADYPPY EFTTKENGKT KYVGFEVSLA KQFAKDLGVK LVIKNMDFDS LLVALETGKI
DAIISGMNVT AERKKSVDFS NTYYSGDSYF LINKGDKDKL VNVKSFNGKN VGAQNGTLQS
TLISKEMPKA NGKGLAKLSS LVIGLQSHKY DGILMDAATA KAYAANNSNL YAFNSKLPNT
AGGIAMAFPK GDTSLVNAAN QTIKKVNKEQ LINKKWIPEA SQYMKSYKKQ NTVLSYWRYF
AKGIKYTLII TVVSVIFGFL LGTLFALMRL SKNKFLHSIA VCYIEFLRGT PMMVQIMFVY
FGIGALIQSL PALLAGIIAV SLNSGAYVAE IIRSGIQSIP LGQTEAARSL GMSKNETFRY
VIMPQALKNI WPALGNELIT LLKDSSLVSV IGVSELMYQT QLVQSATYKG VLPLFITMII
YFILTFTLSR ILFYFEGRMK HAH
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