Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0672 |
Symbol | |
ID | 5188324 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 738741 |
End bp | 740261 |
Gene Length | 1521 bp |
Protein Length | 506 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640590505 |
Product | HK97 family phage major capsid protein |
Protein accession | YP_001271274 |
Protein GI | 148543904 |
COG category | [R] General function prediction only |
COG ID | [COG3740] Phage head maturation protease |
TIGRFAM ID | [TIGR01543] phage prohead protease, HK97 family [TIGR01554] phage major capsid protein, HK97 family |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGAAAC GACTAACAAC TAACGCAGGT TTACAAACGG TAAGCCCTAA AGAAGACCCA ACAAAAGACC AGCAAGACAA CCAAGATGAA ACGCAAGCCT CACAGCCTAA TACAGTTGAA GGCTATGCGT TACTCTTTAA TCAACCCAGC AAGGACTTAG GCGGTTTTGT TGAAGTGATT GACCCTAGCG CCCTTGATAA CGTAGACCTA TCCAATGTAG TTATGCTTGA TCAACACGAC TACACTAAGC CACTAGCAAG CGTTAAGGCT GGTTCATTAC AACTTGATGT GGACGATAAG GGGCTTCACT TCAAGGCAAC TATTGATCCA AGTGTAAGTT ACGCAAGTGA CACTCTTAAT AATGTTAAGA ATGGGAACAT TAATTCTATG TCTTTCCGTT TTGATGTTGA TGATGGTTCT GACAGTTGGA CACGTGACGA CAACGGACAA ATTACACGCA CCGTTAATCA GATTAAAGAT TTATTTGAGG TTTCAACCGT TACAGTGCCT TCATATGATC AGACAAATGT TGATGTAGAT AAAACAAGCA TTCGTAGTTA CAACCAATTT ATCGAAAGTG AGGAACATAA TAAAATGCAA CACACAATCT TAGACCCCAA AAACAATACA GAACAACCAG CTAACGCCTT TGAAAGCTTC ATTCGTTCAC GTGGTGAAAC CCGTGACGGA TTAACAACTA AGGGGGCAGA AGCTGTTATC CCAGAAGAAG TTGTTACTCC AGTCCTAGAC TTAAAGAACA GTGCTTATAA CTTAGCGAAG TACGCTACTG TAAAGACTGT AGGGACTGGT TCCGGTCATT ATCCAATCGC TACCCGTTAC AACACAGCGG TACTTACTAC TAAGGAAGAA CAAGCAGAAA TTGCTGATGT AGACGCTAAT ATGTTTGAAG ATGTGAAGTT TGATGTAAAG ACCCGTGCCG GTAAGATTGC ACTATCAAAT GAAGTTGTTG ACGATTCAGA AGTTGATATT GTATCTGAAG TAAAGAACCA ACTTCAAAAG TTAGTTGATA ACACTGATAA CGCTGAAATT ATCAAGGTAT TACAAGGCGA TAACTTTACT AAGAAAACCG TAGCTAATGT TGATGACTTG AAGCAAGTAT TCAACGTTGA CCTTGACCCA GCCTTACAAA GTACTTCTAC ATGGTTAGTA AATCAATCAG CTTTCCAAGT ATTAGATACT TTGAAAGACA ATGAAGGACG TTACTTATTA CAACCAGATG TAACCGCTCC TAGTGGATTT TCTTTACTTG GTCAACCCGT TGTTAAGATT AGTAATAAGT TCTTACCAGA TAACACGGAC GGTTCACATC CAATGATTTT AGGTGATATT TCAGAAGCGG TAGCAGTATT CCGGCGTAAT CAAGTTACAG CCCAATGGGA CAAGTTCGAT AGTTACAGTC AAGGCTTATC TGTTATCGTC CGTAACGACT ACCAACCAAT TAGTAATGAC GCTGCTTTCA ATCTCTCTTT AACCACAACT AAGGCAACCG AAAGTAAATA A
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Protein sequence | MEKRLTTNAG LQTVSPKEDP TKDQQDNQDE TQASQPNTVE GYALLFNQPS KDLGGFVEVI DPSALDNVDL SNVVMLDQHD YTKPLASVKA GSLQLDVDDK GLHFKATIDP SVSYASDTLN NVKNGNINSM SFRFDVDDGS DSWTRDDNGQ ITRTVNQIKD LFEVSTVTVP SYDQTNVDVD KTSIRSYNQF IESEEHNKMQ HTILDPKNNT EQPANAFESF IRSRGETRDG LTTKGAEAVI PEEVVTPVLD LKNSAYNLAK YATVKTVGTG SGHYPIATRY NTAVLTTKEE QAEIADVDAN MFEDVKFDVK TRAGKIALSN EVVDDSEVDI VSEVKNQLQK LVDNTDNAEI IKVLQGDNFT KKTVANVDDL KQVFNVDLDP ALQSTSTWLV NQSAFQVLDT LKDNEGRYLL QPDVTAPSGF SLLGQPVVKI SNKFLPDNTD GSHPMILGDI SEAVAVFRRN QVTAQWDKFD SYSQGLSVIV RNDYQPISND AAFNLSLTTT KATESK
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