| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0653 |
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| Symbol | clpX |
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| ID | 5188199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus reuteri DSM 20016 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009513 |
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| Strand | + |
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| Start bp | 722464 |
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| End bp | 723714 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640590486 |
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| Product | ATP-dependent protease ATP-binding subunit ClpX |
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| Protein accession | YP_001271255 |
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| Protein GI | 148543885 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
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| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000166657 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGAAG ATACCACTGG TATGGATTCA GTTCACTGTT CATTTTGTGG AAAGTCCCAA
GATGAAGTGA AAAAAATTGT TGCTGGTCCT GGCGTCTATA TTTGTAACGA ATGTGTTGAC
CTTTGTAAAC AAATTATTGA TCAGGAATTA GCAGAAGATG AAGCTAAAAA AGCTTTCCGT
GTGCCAACTC CAGGAGAGAT TGTTAACGAA CTGGATGACT ATGTAATTGG TCAAGGTGAT
GCTAAAAAAA CATTAGCAGT TGCTGTTTAT AACCACTATA AGCGGGTTAA TGCAATGATG
AGTGGTGATA ATAATGATAC AGAACTTCAA AAGAGCAACA TTGCCGTAAT TGGTCCAACT
GGTTCTGGGA AAACCTATCT TGCCCAGTCA CTTGCCCGCA TTCTCAATGT TCCATTTGCG
ATTGCAGATG CTACAACTTT AACTGAAGCT GGATACGTTG GTGAAGATGT TGAGAATATT
ATCCTTAAAC TACTTCAGGC TGCTGACTTT GATGTAGAAC GTGCTGAAAA AGGAATCATT
TACATTGACG AAATTGATAA AATCGCAAAG AAGAGTGAAA ATGTATCAAT TACACGTGAT
GTTTCTGGAG AAGGGGTTCA ACAAGCTCTT TTAAAGATTC TTGAAGGAAC AATTGCTAAT
GTACCGCCTC AGGGAGGACG TAAGCATCCA CAGCAAGAAT TTATCCAAGT CGATACAAAG
AATATCCTCT TTATTGTGGG GGGAGCCTTT GATGGGATCG AAACAATTGT TAAGGAACGA
CTTGGTGATA AGACAATTGG ATTTGGAACA GACTCACGAG AAGCTGAAGA GGTTACGGAT
AAAAATATTT TGCAACATGT TATTCCAGAA GACCTTCTTA AGTTTGGCTT GATTCCAGAA
TTTATCGGAC GATTACCTGT GATGACTGCT CTTGAAAAAC TTGATGAAGA TGACCTTGTT
CGAATCCTTA CTGAGCCGAA GAATGCATTA GTTAAGCAAT ATCAAGAGTT AATTCGCCTT
GATGGAAGTC AGTTGACCTT TACTGATGGT GCATTACGAG CAATGGCACA ACTAGCAATC
AAGCGGAATA CAGGTGCTCG TGGTCTCCGT TCGATTATTG AAGATGTAAT GCGGGATGTA
ATGTTTGACT TGCCAAGTCG TAAAGATGTA GAAAAGGTAA TTATTGATAA ACGATGTGTA
ACGCAACATA CAGAACCTCG TTACGTTTTA AAGGATGAAA AAGCTTCTTA A
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| Protein sequence | MFEDTTGMDS VHCSFCGKSQ DEVKKIVAGP GVYICNECVD LCKQIIDQEL AEDEAKKAFR
VPTPGEIVNE LDDYVIGQGD AKKTLAVAVY NHYKRVNAMM SGDNNDTELQ KSNIAVIGPT
GSGKTYLAQS LARILNVPFA IADATTLTEA GYVGEDVENI ILKLLQAADF DVERAEKGII
YIDEIDKIAK KSENVSITRD VSGEGVQQAL LKILEGTIAN VPPQGGRKHP QQEFIQVDTK
NILFIVGGAF DGIETIVKER LGDKTIGFGT DSREAEEVTD KNILQHVIPE DLLKFGLIPE
FIGRLPVMTA LEKLDEDDLV RILTEPKNAL VKQYQELIRL DGSQLTFTDG ALRAMAQLAI
KRNTGARGLR SIIEDVMRDV MFDLPSRKDV EKVIIDKRCV TQHTEPRYVL KDEKAS
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