Gene Lreu_0598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0598 
SymbolileS 
ID5189657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp666996 
End bp669878 
Gene Length2883 bp 
Protein Length960 aa 
Translation table11 
GC content40% 
IMG OID640590433 
Productisoleucyl-tRNA synthetase 
Protein accessionYP_001271202 
Protein GI148543832 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0060] Isoleucyl-tRNA synthetase 
TIGRFAM ID[TIGR00392] isoleucyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000596981 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTACCGC GAAGAAGCTT CGTCCCAGTA ATGGGAGGAA GCTTTTTTAT TATTAAAATA 
CAAGAATTAA TGAAAGGGGT AGTTACAATG CGTGTTAAAG ATACGTTAAA CCTTGGCCGT
ACTAAATTTC CAATGCGCGG AAAGTTACCT GTAACTGAGG CACAACGGGA ACAGCTATGG
GAAGAAAATA AAGTTTATGA ACTACGACAA AAATTAAATG AAGGAAAGCC TACTTTTGTT
TTACATGATG GGCCTCCATA TGCTAACGGT AATATTCACA TTGGCCACGC TATGAACAAG
ATTTCTAAAG ATTTTATTGT GCGCTATAAG TCAATGTCTG GCTACCGAGC ACCTTATGTT
CCTGGTTGGG ATACTCACGG ATTGCCAATT GAACACCAAT TGACTAAGTC CGGTTACGAC
CGTAAGAAGA TGAGCTTAAC TGAATTCCGT GATCTTTGTC GGGAATATGC CCTTAAGCAA
GTTGATAAGC AACGGACTGA CTTTAAGCGG TTAGGTGTAA GTGGTGAATG GGATCATCCA
TACCTTACCC TTGATAAAGA ATTTGAAGCT GCTCAAATTC GGGTATTCGG CGAATTTGCT
AAGAAAGGTC TATTATACCA AGCTAAGAAG CCAGTTTACT GGTCATGGTC TTCAGAATCA
GCCTTAGCAG AAGCCGAAGT TGAATATCAT GATGTTGTTG CTAAAACAGC CTTCTTCGTA
GAGCAAATTA AAGATGGCAA AGGCCGTTTA GATAATGATA CATATTTAGT TGTATGGACG
ACAACACCAT GGACTGTTCC TGCTTCTGAG GCAGTTGCAG TTAATCCAAA GTTTGATTAC
TCTGTTGTAA ATCCAGCAAA TGATGACCGG AAATTTGTTG TTGCAACAGA TCTGCTTGAG
AAATTAGCGG AAAAACTTGG TTGGGAAGAT TATGAAGTTG TTGATCATTT AATGGGTCAA
GAACTTGAAG GGATGACTAC TCAACACCCA TACCTTGATC GTGATCTTCT TGTTGGTTTA
GCAGATTATG TTACTGCTGA TGCTGGTACT GGCCTTGTTC ACACTGCTCC TGGATATGGG
GATGATGATT ACAACTTTGG TAAAAAGTAT GACTTGCCAA TTTTTGCCCC AATCAATGAT
CAAGGTGTTT TAACTAAGGA AAACGGTGAA GGCTTTGAAG GGGTATTCTA CCAAGATGCT
GATGATGTAT CTCTTCAAAA GCTAGAAGAA AACAATGCTT TACTTCTTCA AGAGCCATTG
CAACACAGTT ACCCATTTGA TTGGCGGACA AAGCAACCAA TCATCTTCCG GGCAACTGAT
CAATGGTTTG TATCAATTGA AAAGATGCGC CAAAATATTT TAGATGCCTT AGAAGACGTT
AAGTATCACC CAGAATGGGG AAAGGTTCGT CTTCGCAATA TGATCAAAGA CCGTGGTGAT
TGGGTAATTT CTCGTCAACG TGTTTGGGGT GTACCTCTAC CAATCTTCTA TGCTGAAGAT
GGCACACCAA TCATGGAAGA AGAAACAATC AACCATGTAG CAGAATTATT TGCTAAGTAT
GGTTCTAATG TTTGGTTTGA ACGTGAAGCA AAAGATCTTT TGCCAGAAGG ATACACTAAT
GAACATTCTC CTAATGGTAA GTTCACTAAG GAAACTGACA TTATGGACGT ATGGTTTGAT
TCTGGTTCAT CACACCAAGG GGTATTAGCT GAACGTGATT ACTTAACATA CCCAGCGGAC
CTTTACCTTG AAGGGTCTGA CCAATACCGT GGTTGGTTTA ACTCTAGTTT GATTACCAGT
GTTGTATGTT CAGGACATGC GCCATATAAG GAAATCGTTT CTCAAGGGTT CACACTTGAT
AAGCGCGGTA ACAAGATGAG TAAATCTCAA GGTAACGTTA TCGATCCAAA TAAGGTTGTT
CAACAAATGG GTGCGGAAAT TATCCGGTTA TGGGTAATGA GTGCTGATAC TTCGGCTGAT
GTTCGTGTAT CGATGGGAAC ATTCCAACAG ATTTCCGAAG CATATCGTAA GTTGAGAAAT
ACGTTCCGCT TCTTACTTGC TAATACTAGT GACTTCAATC CTGAAGAAAA TACTGTTTCT
TATGAGAAGT TACAATCGGT AGACAAGTAC ATGTTGGTTA AACTTAACCA CTTCTTGAAG
ACAATGCGGG AAGATTTTGA TAACTATGAC TTCCTTGATG CTTATAAGGT ATTGATCAAT
TTTGTAAACA ACGATCTTTC AGCTTTCTAC ATGAACATTG CTAAAGATGT GCTCTATATT
GAGGCTGAAA ATTCAGAAGT TCGGCGGTCA ATGCAAACTG TCTTCTATGA TATCCTTTTG
ACACTTGTTA AGCTTCTTAC ACCAATCCTT CCTCACACTA CAGAAGAAGT ATGGAGCTAC
ATGAATGAAC CGGAAGATTT TGTTCAATTA ACTGAAATTC CAGATCCACG GACATTCGCT
GGTGAAGAAG AGCTATTGAG CAAGTGGGAT GACTTTATGG AAGTACGTTC ACATGTTCTG
AAGAGTCTTG AAGAGGCACG GAATGCTAAG CTAATCGGTA AATCTCTTGA AGCTCAAGTT
GATCTTTACT TAACCGATGA CCAAAAGCAA TTACTTGATA GTCTTAATGA AAACATTCAA
TTATTGCTAG GGGTTTCTGC TCTTCATGTA CATCCAGCTG ATGAAGCGCC TGCTGATGCT
GACCAATACA ACGATGGGGT AGCAGTTAAG GTTACAACCG CTAATGGTGA AACTTGTGCT
CGTTGTCGTA TGGTCAAGGA AGACGTTGGC AGTGATCCAG CATATCCTGA ATTATGTGCT
CGCTGTGCTG CTATTGTTCG GGAAAACTTC CCTGAAACAG CAGAAGATGG TTTAGAAGAA
TAA
 
Protein sequence
MVPRRSFVPV MGGSFFIIKI QELMKGVVTM RVKDTLNLGR TKFPMRGKLP VTEAQREQLW 
EENKVYELRQ KLNEGKPTFV LHDGPPYANG NIHIGHAMNK ISKDFIVRYK SMSGYRAPYV
PGWDTHGLPI EHQLTKSGYD RKKMSLTEFR DLCREYALKQ VDKQRTDFKR LGVSGEWDHP
YLTLDKEFEA AQIRVFGEFA KKGLLYQAKK PVYWSWSSES ALAEAEVEYH DVVAKTAFFV
EQIKDGKGRL DNDTYLVVWT TTPWTVPASE AVAVNPKFDY SVVNPANDDR KFVVATDLLE
KLAEKLGWED YEVVDHLMGQ ELEGMTTQHP YLDRDLLVGL ADYVTADAGT GLVHTAPGYG
DDDYNFGKKY DLPIFAPIND QGVLTKENGE GFEGVFYQDA DDVSLQKLEE NNALLLQEPL
QHSYPFDWRT KQPIIFRATD QWFVSIEKMR QNILDALEDV KYHPEWGKVR LRNMIKDRGD
WVISRQRVWG VPLPIFYAED GTPIMEEETI NHVAELFAKY GSNVWFEREA KDLLPEGYTN
EHSPNGKFTK ETDIMDVWFD SGSSHQGVLA ERDYLTYPAD LYLEGSDQYR GWFNSSLITS
VVCSGHAPYK EIVSQGFTLD KRGNKMSKSQ GNVIDPNKVV QQMGAEIIRL WVMSADTSAD
VRVSMGTFQQ ISEAYRKLRN TFRFLLANTS DFNPEENTVS YEKLQSVDKY MLVKLNHFLK
TMREDFDNYD FLDAYKVLIN FVNNDLSAFY MNIAKDVLYI EAENSEVRRS MQTVFYDILL
TLVKLLTPIL PHTTEEVWSY MNEPEDFVQL TEIPDPRTFA GEEELLSKWD DFMEVRSHVL
KSLEEARNAK LIGKSLEAQV DLYLTDDQKQ LLDSLNENIQ LLLGVSALHV HPADEAPADA
DQYNDGVAVK VTTANGETCA RCRMVKEDVG SDPAYPELCA RCAAIVRENF PETAEDGLEE