Gene Lreu_0535 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0535 
Symbol 
ID5189189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand+ 
Start bp600275 
End bp600718 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content41% 
IMG OID640590342 
ProductHolliday junction resolvase-like protein 
Protein accessionYP_001271140 
Protein GI148543770 
COG category[L] Replication, recombination and repair 
COG ID[COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 
TIGRFAM ID[TIGR00250] RNAse H-fold protein YqgF 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.00000331559 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATTAA TGGGATTAGA CGTTGGCTCT AAAACGGTTG GCATTTCTGT AAGCGATCCT 
CTCGGTTGGA CGGCCCAAGC AGTTGAGATT ATTCCAATTG ATGAAGAAAA CGAAATTTTT 
GGGATTGATC GTGTTGCCGA GCTAGTGAAA AAAGAACAGG TAGCTGGGTT TGTAATTGGC 
CTTCCTAAAA ATATGAATAA TACAGAAGGC CCTCGTGTTG AAGCATCTCA GCACTATGGC 
AAGCTATTAC AACAACGTTT TCCAGATATT CCTATTGACT TTCAAGATGA ACGTTTAACG 
ACGGTTGAGG CACACCGAAT GCTAGTTGAA GAAGCGGACA TTTCACGTGC TAAGCAGAAA 
AAAGTTATCG ATGAAGTTGC AGCAACATTC ATTTTACAAA GCTATTTGGA TCGCCATGGC 
CGCCTTGTGA ATAAGCTAAA ATGA
 
Protein sequence
MRLMGLDVGS KTVGISVSDP LGWTAQAVEI IPIDEENEIF GIDRVAELVK KEQVAGFVIG 
LPKNMNNTEG PRVEASQHYG KLLQQRFPDI PIDFQDERLT TVEAHRMLVE EADISRAKQK 
KVIDEVAATF ILQSYLDRHG RLVNKLK