| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0528 |
|---|
| Symbol | ruvB |
|---|
| ID | 5189906 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | + |
|---|
| Start bp | 591703 |
|---|
| End bp | 592719 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640590335 |
|---|
| Product | Holliday junction DNA helicase RuvB |
|---|
| Protein accession | YP_001271133 |
|---|
| Protein GI | 148543763 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
|---|
| TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 48 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAAAATG ATCATGGTAT TTTATCAGAT CACCCATCAG GAGAAGAAGA AAGCCAAGTT
GAGATAACTC TTCGACCACA GAAACTAAGG GAATATATTG GTCAACCTAA AATCAAGCAC
GAACTAGAAG TATATATTAA GGCGGCCCAA TCCCGGGAAG AAGCCCTTGA CCATGTATTG
TTATATGGTC CTCCAGGATT AGGAAAGACA ACTTTAGCGA TGGTAATAGC TAATGAGATG
GGCGTTAATA TCAGAACGAC TAGTGGACCA GCGATCGAAA AGCCAGGAGA TTTGGTTGCT
TTATTGAATG AGTTGAAACC AGGGGATGTC CTTTTTGTTG ATGAAATCCA CCGGTTACCC
AAAGTTGTGG AAGAAATGCT TTATTCAGCG ATGGAAGATT ACTATATTGA TATTGTTATT
GGTGAGGGAC CAACTGCGCA CCCCGTTCAT TTTCCCCTTC CGCCATTTAC ATTAATTGGG
GCAACGACAC GGGCCGGAAT GTTATCGGCA CCATTACGTG ATCGTTTCGG GATCGTTGAA
CACATGAACT ACTATACTCA AGATGAACTG ACAAAAATTA TTTTTCGTTC TGCCAAGATT
TTCCATACTA GCATTCAAGA TGAAGGGGCC CATGAACTAT CTCTTCGTTC ACGTGGTACG
CCGCGAATCG CAAACCGCCT TTTAAAACGG GTACGTGATT TTGCTCAGGT AGCAGGGAAA
CAAAGCATTG ATTCAGCAAT TGTTAAGCAA GCATTATCCC TTCTCCAAGT TGATGATCGG
GGCTTAGATG AGATTGATCG GAAAATGCTA TTAACGATGA TCAATTTCTA CCATGGAGGT
CCAGTGGGAT TAAAAACAAT TGCGGCAAAT ATTGGTGAAG AAACTAATAC GATTGAAGAA
ATGTATGAAC CATATCTATT ACAGATTGGC TTTATTAGTC GCACCCCTCG CGGCCGGTTA
GTGACACCGA CAGCGTATGA ACATTTAGGG ATTGAATATC CTACTGATAA AAATTGA
|
|---|
| Protein sequence | MENDHGILSD HPSGEEESQV EITLRPQKLR EYIGQPKIKH ELEVYIKAAQ SREEALDHVL
LYGPPGLGKT TLAMVIANEM GVNIRTTSGP AIEKPGDLVA LLNELKPGDV LFVDEIHRLP
KVVEEMLYSA MEDYYIDIVI GEGPTAHPVH FPLPPFTLIG ATTRAGMLSA PLRDRFGIVE
HMNYYTQDEL TKIIFRSAKI FHTSIQDEGA HELSLRSRGT PRIANRLLKR VRDFAQVAGK
QSIDSAIVKQ ALSLLQVDDR GLDEIDRKML LTMINFYHGG PVGLKTIAAN IGEETNTIEE
MYEPYLLQIG FISRTPRGRL VTPTAYEHLG IEYPTDKN
|
|---|
| |